Fig. 5From: Linear models enable powerful differential activity analysis in massively parallel reporter assaysNumber of rejections as a function of observed error rate. To compare the observed detection (rejection) rates of the methods fairly, we compare them at the same observed type I error rates, estimated in Fig. 4. The bottom two rows are zoomed-in versions of the top row. We see that mpralm, edgeR, and DESeq2 consistently have the highest detection ratesBack to article page