Skip to main content
Fig. 6 | BMC Genomics

Fig. 6

From: In silico analysis of fungal small RNA accumulation reveals putative plant mRNA targets in the symbiosis between an arbuscular mycorrhizal fungus and its host plant

Fig. 6

Characterization of Rir-sRNA generating loci. a) Biplot of principal component 1 and 2 of PCA based on the length of loci, the total number of mapped reads and the nucleotide size proportion of Rir-sRNAs (from 18 nt to 35 nt) defining each locus (19 total variables); b) DBSCAN clustering reveals the presence of two distinct populations of data (Cluster 1 and 2); c) Overview of the positions of the loci compared to those of protein-encoding genes; d) Differential expression analysis of loci between ERM (extra radical mycelium) and RM (mycorrhizal root) conditions (ERM = up-regulated in ERM; No = not differentially regulated; RM = up-regulated in RM)

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us