Table 4 In silico identification of core promoter elements in genes of each expression class

Genes with core promoter motifs/total genes

84/338 (25%)

217/778 (28%)

810/4475 (18%)

280/1597 (18%)

87/409 (22%)

1478/7597 (20%)

TATA box

40

84

257

137

71

589

GAAC box

37

102

462

120

13

734

Inr box

3

15

57

13

2

90

Genes with TATA and GAAC

4

13

22

7

0

46

Genes with TATA and Inr

0

2

3

1

0

6

Genes with GAAC and Inr

0

1

9

2

1

13

Genes with All three

0

0

0

0

0

0