Skip to main content

Table 5 Expression status and motif occurrence in virulence-related genes

From: Transcriptomic analysis reveals novel downstream regulatory motifs and highly transcribed virulence factor genes of Entamoeba histolytica

Gene

No. of members

Expression class

Most common motifs

VH

H

M

L

VL

Amoebapore

4

4

–

–

–

–

M10 > M4 = M6 = M1

CP

28

3

3

13

6

3

M10 > M1 > M5 > L_M3 = L_M4 = M11

C2 domain containing

10

1

2

5

2

–

M5 = M1 > M10 > M11

©AIG1

28

–

–

8

15

5

M5 > M10 = M1 = M2 = L_M4

Gal/GalNac lectin

14

3

8

3

–

–

M1 > M5 > M10 > M2 = M11

Grainin

4

2

2

–

–

–

M4 = M5 > M1

Lysozyme

4

1

–

3

–

–

M5 > M1 > M10

Myb family

24

–

2

18

3

1

M1 > M10 = M2 > M5 > M11

Peroxiredoxin

10

6

2

1

1

–

M11 > M10 > L_M3

20 kDa antigen

2

1

1

–

–

–

M1 > M5

Surface antigen ariel1

10

4

2

1

1

2

L_M4 > L_M3 = L_M9 = M1

  1. Legend: Multiple occurrence of a motif in the same gene was not considered.©Several members of these genes had no predicted motif