Table 1 Assembly and gene prediction information of Botrytis spp. genomes
From: Comparative genomics of plant pathogenic Botrytis species with distinct host specificity
Species | Scaffolds | Assembly Size | Largest Scaffold | N50 | BUSCO complete/partial | Predicted genes | Secretome size | % of secreted proteins |
|---|---|---|---|---|---|---|---|---|
B. calthae | 3985 | 47.56 Mb | 293,700 | 56,053 | 97.5 (98.5) | 12,492 | 745 | 5.96 |
B. convoluta | 2054 | 45.40 Mb | 436,056 | 97,955 | 98.7 (99.1) | 12,532 | 752 | 6.00 |
B. elliptica | 5594 | 47.68 Mb | 230,072 | 36,976 | 99.2 (99.3) | 12,663 | 762 | 6.02 |
B. galanthina | 3422 | 43.97 Mb | 354,402 | 65,043 | 98.9 (99.0) | 12,575 | 784 | 6.23 |
B. hyacinthi | 2509 | 43.91 Mb | 532,180 | 115,520 | 99.0 (99.2) | 12,197 | 752 | 6.17 |
B. narcissicola | 8392 | 54.85 Mb | 289,279 | 43,203 | 96.3 (98.1) | 12,341 | 730 | 5.92 |
B. paeoniae | 1833 | 46.36 Mb | 901,367 | 125,168 | 99.0 (99.2) | 12,138 | 746 | 6.15 |
B. porri | 4737 | 43.11 Mb | 181,158 | 35,774 | 97.4 (97.9) | 12,033 | 716 | 5.95 |
B. tulipae | 653 | 45.45 Mb | 738,496 | 172,411 | 98.8 (99.0) | 12,656 | 750 | 5.93 |