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Table 2 Enriched KEGG pathways of DEGs in the four comparisons and a common group

From: RNA-Seq analysis reveals transcript diversity and active genes after common cutworm (Spodoptera litura Fabricius) attack in resistant and susceptible wild soybean lines

 

Corrected P-value

   

Pathway

R1d

R3d

S1d

S2d

146 Common DEGs

Pathways ID

Level

Biosynthesis of secondary metabolites

9.55E-03

1.64E-15

0.002504

2.68E-06

8.60E-04

ko01110

Global and overview maps

Isoflavonoid biosynthesis

 

1.67E-15

   

ko00943

Biosynthesis of other secondary metabolites

Flavonoid biosynthesis

 

2.09E-13

6.55E-04

7.50E-03

 

ko00941

Biosynthesis of other secondary metabolites

Phenylpropanoid biosynthesis

 

2.36E-06

2.50E-03

1.53E-04

3.54E-03

ko00940

Biosynthesis of other secondary metabolites

Metabolic pathways

 

9.83E-06

 

2.21E-04

3.54E-03

ko01100

Global and overview maps

Tryptophan metabolism

 

1.08E-06

 

1.46E-03

1.25E-03

ko00380

Amino acid metabolism

Glutathione metabolism

 

9.07E-08

 

7.87E-04

 

ko00480

Metabolism of other amino acids

Cyanoamino acid metabolism

 

9.35E-04

   

ko00460

Metabolism of other amino acids

Starch and sucrose metabolism

 

3.69E-04

   

ko00500

Carbohydrate metabolism

Cutin, suberin and wax biosynthesis

 

9.35E-04

 

3.16E-06

 

ko00073

Lipid metabolism

Glycerolipid metabolism

 

1.39E-03

   

ko00561

Lipid metabolism

Photosynthesis-antenna proteins

 

1.08E-06

   

ko00196

Energy metabolism

Ribosome biogenesis in eukaryotes

  

2.50E-03

  

ko03008

Translation

  1. Bold font indicates that the 5 groups are only significantly different in R3d. R1d, R3d, S1d, and S2d represent the comparison of the treatments vs controls of W99 at 1 d, W99 at 3 d, W11 at 1 d, and W11 at 2 d. KEGG: Kyoto Encyclopedia of Genes and Genomes. DEG: differentially expressed gene