Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli

Table 2 Reconstructed circular sequence assembled for Australian Xanthomonas draft genomes from whole genome sequence data

Strain	Species ^a	Plasmid number ^b	Plasmid .0 ^c	Plasmid .1	Plasmid .2	Plasmid .3
BRIP 62410	xa	0
BRIP 62412	xa	0
BRIP 62414	xa	0
BRIP 62416	xa	1	17,377
BRIP 62432	xe	1	17,382
BRIP 62441	xe	1	31,328
BRIP 62555	xe	1	31,328
BRIP 62757	xe	2	159,114	31,328
BRIP 62858	xe	3	8247	159,114	31,328
BRIP 62959	xe	1	159,115
BRIP 38997	xe	2	17,360	***40,439
BRIP 63464	xe	2	159,114	31,328
BRIP 39016	xe	2	32,900	28,462
BRIP 62396	xe	2	31,328	4316
BRIP 62400	xe	1	31,328
BRIP 62403	xe	2	31,328	159,114
BRIP 62390	xe	2	159,114	31,328
BRIP 62391	xe	2	8247	31,328
BRIP 62392	xe	1	31,328
BRIP 62395	xe	1	31,328
BRIP 62438	xe	0
BRIP 62425	xe	3	31,328	159,114	17,360
DAR 34895	xe	1	31,318
DAR 82542	xe	4	2587	17,350	***40,429	31,318
DAR 26930	xe	1	8201
BRIP 62383	xp	1	1418
BRIP 62384	xp	1	2808
BRIP 62398	xp	1	7812
BRIP 62404	xp	1	2808
BRIP 62397	xp	1	**41,842
BRIP 62386	xp	1	2808
BRIP 62405	xp	2	2589	5031
BRIP 63262	xp	2	2589	5031
BRIP 63565	xp	1	2808
BRIP 63666	xp	1	1418
BRIP 62389	xp	0
BRIP 62409	x sp	0
BRIP 62411	x sp	1	28,836
BRIP 62415	x sp	0
BRIP 62418	x sp	1	1418
DAR 33341	x sp	2	7154	4921
BRIP 38864	xv	2	*88057	41,641
BRIP 62388	xv	0
BRIP 62413	xv	1	*47218
BRIP 62423	xv	1	*47218
BRIP 62428	xv	1	*47218
BRIP 62429	xv	1	*47214
BRIP 38861	xv	2	*88063	41,641
DAR 26931	xv	1	*88047
DAR 26933	xv	0

^aspecies as determined by whole genome SNP phylogeny and ANI
^bcircular sequences assembled by recycler for each strain
^ccircular sequence ID is indicated by decimal value after strain ID
Length is described in base pairs. * indicates the predicted plasmid contains AvrBsT, ** XopH, ***AvrBs3

ISSN: 1471-2164