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Fig. 3 | BMC Genomics

Fig. 3

From: Combining microfluidics and RNA-sequencing to assess the inducible defensome of a mushroom against nematodes

Fig. 3

Comparison between microfluidics and agar-based confrontation of C. cinerea and A. avenae. a Venn diagram representing significantly upregulated genes for two different setups (microfluidic device and agar plate). b 20 out of 22 DEGs shared between microfluidics-8 h and agar plate assay have higher relative expression in microfluidics compared to agar plate. c 18 of 19 DEGs shared between microfluidics-20 h and agar plate assay reveal a higher relative expression in the microfluidic devic . Genes with fold change of ≥4 and FDR ≤ 0.05 considered as significantly induced

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