Table 1 Summary of sequencing and assembly of the transcriptome from L. vannamei
| Â | Raw Reads | Clean Reads | Percentage retained | Gene number | Ratio |
|---|---|---|---|---|---|
PHc-1 | 47,181,514 | 45,798,586 | 97.07% | 25,525 | 56.98% |
PHc-2 | 41,051,168 | 39,912,832 | 97.23% | 24,555 | 54.82% |
PHc-3 | 49,325,926 | 47,856,124 | 97.02% | 31,895 | 71.21% |
PHc | 137,558,608 | 133,567,542 | 97.10% | 35,596 | 79.47% |
WHc-1 | 59,987,346 | 58,029,050 | 96.74% | 37,885 | 84.58% |
WHc-2 | 56,726,760 | 55,039,876 | 97.03% | 33,889 | 75.66% |
WHc-3 | 49,738,732 | 48,241,248 | 96.99% | 33,763 | 75.38% |
WHc | 166,452,838 | 161,310,174 | 96.91% | 42,851 | 95.66% |