Table 1 Transposable elements detected in 1 Mb IBH region
Element class | Subclass | Most frequent elements | Number of elements | Percentage on region |
|---|---|---|---|---|
SINEs | MIRs | MIR, MAR1 | 134 | 1.26% |
tRNA & core-RTE | Bov-A2, Bov-tA | 518 | 6.69% | |
LINEs | L1 | L1 | 248 | 14% |
L2 | L2 | 48 | 1.18% | |
CR1(L3) | L3 | 7 | 0.11% | |
RTE-BovB | BovB | 304 | 21.32% | |
LTR elements | ERVL | ERVL, LTR16 | 32 | 1.99% |
ERVL-MaLRs | MLT1 | 36 | 0.91% | |
ERV classI | ERV1, ERV54, LTR1 | 29 | 1.19% | |
ERV classII | BTLTR1 | 75 | 0.89% | |
DNA elements | Â | MERs, hAT-Charlie, TcMars-Tigger | 98 | 2.09% |