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Table 5 Comparison of the regions associated with resistance to P. teres f. teres, identified in the current study and previous studies

From: SNPs associated with barley resistance to isolates of Pyrenophora teres f. teres

chr

Isolate

p-value

Marker

cM

Previuosly identified QTLs (cM)

1H

P3.4.0

4.35E-05

JHI-Hv50k-2016-33086b

57.3-62.8

(52.4-56.8 cM) Grewal et al., 2012 [10];

(50–86 cM) Afanasenko et al., 2014 [2];

(92.2 cM) Amezrou et al., 2018 [8];

(95.9 cM) Vatter et al. 2017 [18]

P3.4.0

5.54E-05

JHI-Hv50k-2016-33097b

P3.4.0

7.32E-05

JHI-Hv50k-2016-33099b

P3.4.0

7.32E-05

JHI-Hv50k-2016-33104b

P3.4.0

5.54E-05

JHI-Hv50k-2016-33109b

P3.4.0

9.74E-05

JHI-Hv50k-2016-33120b

K5.1

1.45E-04

JHI-Hv50k-2016-33160c

P3.4.0

9.13E-06

JHI-Hv50k-2016-35839b

P3.4.0

1.01E-04

JHI-Hv50k-2016-36398b

2H

S10.2

1.82E-05

JHI-Hv50k-2016-74407c

23.2-23.8

(10-28.7 cM) Wonneberger et al., 2017 [7];

(8 cM, 23 cM) Vatter et al. 2017 [18]

P3.4.0

2.59E-05

JHI-Hv50k-2016-104508b

71.0-74.1

(48 cM) Arru et al., 2003 [11];

(50–51 cM) Grewal et al., 2008 [5];

(54.2–55.4 cM) Steffenson et al., 1996 [3];

(55.5 cM) Vatter et al. 2017 [18];

(62.7 cM) Cakir et al., 2011 [26];

(51–75 cM) Afanasenko et al., 2014 [2];

(75–80 cM) König et al., 2014 [25];

(57.15, 59.35 cM and 92.22 cM) Amezrou et al., 2018 [8];

(120.04–125.35 сМ) Richards et al., 2016 [17]

P3.4.0

2.59E-05

JHI-Hv50k-2016-104565b

P3.4.0

2.59E-05

JHI-Hv50k-2016-104567b

P3.4.0

2.59E-05

JHI-Hv50k-2016-104667b

P3.4.0

2.82E-05

JHI-Hv50k-2016-104669b

P3.4.0

1.58E-06

BOPA2_12_31445a

P3.4.0

2.30E-07

JHI-Hv50k-2016-104859a

3H

P3.4.0

4.77E-05

JHI-Hv50k-2016-156539b

12.1-17.4

(8.5 cM) Vatter et al. 2017 [18];

P3.4.0

4.77E-05

JHI-Hv50k-2016-156576b

P3.4.0

4.77E-05

JHI-Hv50k-2016-156584b

P3.4.0

6.66E-05

JHI-Hv50k-2016-156586b

P3.4.0

4.64E-05

JHI-Hv50k-2016-156591b

P3.4.0

6.58E-05

JHI-Hv50k-2016-156594b

A2.6.0

2.08E-06

JHI-Hv50k-2016-169338c

50.9-54.8

(52.6-54.8 cM) Koladia et al.,2017 [9];

(51.6 cM) Vatter et al. 2017 [18];

(46.2–54.5 cM) Wonneberger et al., 2017 [7]

A2.6.0

5.96E-06

SCRI_RS_186341c

A2.6.0

1.01E-06

JHI-Hv50k-2016-183207a

K5.1

1.41E-04

JHI-Hv50k-2016-215624c

135.6-137.5

(115–119 cM) Grewal et al., 2008 [5];

(112–150 cM) Afanasenko et al., 2014 [2];

(137,6 cM) Amezrou et al., 2018 [8]

6H

P3.4.0

1.60E-05

SCRI_RS_138529b

52.6-55.4

(50.8–66.4) Wonneberger et al., 2017 [7];

(50.2–58.4 cM) Koladia et al., 2017 [9];

(58 cM) Afanasenko et al., 2014 [2];

(60–65 cM) König et al., 2014 [25];

(75–78 cM) Grewal et al., 2008 [5]

S10.2

2.38E-06

JHI-Hv50k-2016-391875c

S10.2

2.20E-06

JHI-Hv50k-2016-392656c

S10.2

1.10E-05

JHI-Hv50k-2016-392723c

S10.2

2.38E-06

BOPA2_12_30021c

S10.2

1.10E-05

JHI-Hv50k-2016-393052c

P3.4.0

3.24E-08

SCRI_RS_239642a

K5.1

3.14E-05

SCRI_RS_239642c

P3.4.0

1.60E-05

JHI-Hv50k-2016-398663b

P3.4.0

7.59E-05

JHI-Hv50k-2016-398720b

P3.4.0

4.84E-08

SCRI_RS_224389a

P3.4.0

7.59E-05

JHI-Hv50k-2016-398886b

P3.4.0

7.59E-05

JHI-Hv50k-2016-398894b

  1. aSignificant SNPs according the Bonferroni correction
  2. bSignificant SNPs according the FDR
  3. cSuggestive SNPs
  4. Our loci that were confirmed by literature data are in bold