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Table 2 Prevalence of E. coli virulence genes among the eight most prevalent serotypes of the stx2f-carrying E. coli isolates

From: Comparative genomics reveals a lack of evidence for pigeons as a main source of stx2f-carrying Escherichia coli causing disease in humans and the common existence of hybrid Shiga toxin-producing and enteropathogenic E. coli pathotypes

Gene O63:H6 O113:H6 O125:H6 O132:H34 O145:H34 O4:H2 O45:H2 O128:H2
astA 77/80 24/25 24/28 4/7 12/19 4/4 15/15 13/13
bfpA 77/80   24/28 4/7 12/19 4/4 13/15 13/13
cba       4/4 13/15 10/13
cdt-I 80/80 25/25 28/28 7/7 19/19 4/4 15/15 9/13
celB 2/80        
cif 80/80 25/25 28/28    3/4 15/15 13/13
cma       4/4 14/15 10/13
eae 80/80 25/25 28/28 7/7 19/19 4/4 14/15 12/13
-subtype alpha2 beta2 alpha2 alpha2 iota1 beta1 beta1&iota1 beta1
ehly1     6/7     
espA 80/80 25/25 28/28 7/7 19/19 4/4 14/15 12/13
espB 80/80 25/25 28/28 7/7 19/19 4/4 14/15 12/13
espC 77/80   28/28 7/7 18/19    
espF 80/80   27/28 7/7 19/19 4/4 14/15 12/13
espJ 80/80 25/25 28/28      
fyuA   25/25       
irp1   25/25       
irp2   25/25       
irp3   25/25       
irp4   25/25       
iss 1/80      4/4 15/15 13/13
nleA       3/4 15/15 13/13
nleB 2/80   27/28 7/7 19/19 4/4 14/15 13/13
nleC 72/80    1/7   4/4 15/15 13/13
stx 2f 80/80 25/25 28/28 7/7 19/19 4/4 15/15 13/13
tccP 4/80    2/7     
tir 76/80 25/25 28/28 4/7 19/19 4/4 14/15 12/13
-subtype gamma1 alpha1 gamma1 gamma1 alpha1 beta1 beta1 beta1
vat   24/25