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Table 1 Callose metabolism-related genes showed dramaticaly altered expression

From: Comparative transcriptome analysis and ChIP-sequencing reveals stage-specific gene expression and regulation profiles associated with pollen wall formation in Brassica rapa

Brassica rapa

Arabidopsis

Locus

B1/A1

B2/A2

B3/A3

B4/A4

B5/A5

Locus

Gene name

Description

Bra037213

–

–

4.9

5.6

9.4

AT2G13680

GSL2

Callose synthase

Bra004288

–

1.8

–

–

–

AT1G68200

CDM1

Zinc finger C-×8-C-×5-C-×3-H type family protein

Bra026644

–

–

–

–

1.8

AT2G01630

–

Glycosyl hydrolases family 17 protein

Bra036718

–

–

–

2.2

–

AT1G64760

–

Glycosyl hydrolases family 17 protein

Bra010330

–

–

–

–

2.0

AT4G29360

–

Glycosyl hydrolases family 17 protein

Bra028988

–

–

–

2.4

–

AT5G55180

–

Glycosyl hydrolases family 17 protein

Bra037795

–

–

7.0

7.1

8.7

AT5G64790

–

Glycosyl hydrolases family 17 protein

Bra031901

–

–

–

–

6.2

AT5G64790

–

Glycosyl hydrolases family 17 protein

Bra003475

–

1.1

–

2.9

–

AT3G61810

–

Glycosyl hydrolases family 17 protein

Bra001918

−2.7

5.3

−6.2

–

–

AT3G23770

–

Glycosyl hydrolases family 17 protein

Bra019084

–

4.4

−4.5

–

2.3

AT4G26830

–

Glycosyl hydrolases family 17 protein

Bra037057

–

–

−6.0

–

–

AT4G14080

A6

Glycosyl hydrolases family 17 protein

Bra032758

−2.1

1.2

−5.1

1.8

–

AT4G14080

A6

Glycosyl hydrolases family 17 protein

Bra020110

–

–

−7.1

–

–

AT5G20330

–

Glycosyl hydrolases family 17 protein

Bra014979

–

–

−4.3

–

–

AT3G23770

–

Glycosyl hydrolases family 17 protein

  1. All values are expressed in terms of log2FC (fold change), so that positive values indicate depression of gene expression in male sterile line ‘Bcajh97-01A’. Shot dashes represent either no significant difference or no expression