Fig. 7
From: A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds
Features around centromeric AvaI repeats. a Average GC-content was computed from 1kbp windows located within intervals at different distances from AvaI clusters with at least 3 repeats (0-20kbp; 20-40kbp; 40-80kbp; 80-160kbp; 160-320kbp; 320-640kbp; 640–1280kbp; 1280–2560kbp; 2560–5120kbp). 95% confidence intervals were computed from 2000 bootstrap replicates of each interval. b As in A but tracing the density of simple repeats/low complexity sequence. c As in A, but tracing the density of DNA transposons, the dominant interspersed repeat class in the honeybee genome