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Table 2 Sequence content of hybrid assembly

From: A hybrid de novo genome assembly of the honeybee, Apis mellifera, with chromosome-length scaffolds

  Amel4.5 Hybrid assembly (Amel_HAv3)
contig location anchored unplaced all anchored unplaced all
Size (Mbp) 199.72 29.38 229.12 219.39 4.45 223.84
Contigs (n) 7769 8732 16,501 67 160 227
Longest contig (Mbp) 0.333 0.072 0.333 13.400 0.486 13.400
Contig N50 (Mbp) 0.053 0.006 0.046 6.930 0.037 5.381
Contig L50 (n) 1094 1152 1390 12 24 13
Scaffolds (n) 340 340 16 16
GC (%) 33.98 23.94 32.70 32.72 23.45 32.53
Repeats (%) 6.80 10.51 7.27 7.50 21.55 7.78
Mappability (avg. score) 0.967 0.843 0.896 0.985 0.639 0.978
Metazoa BUSCO genes (n,%) 881 (90.1%) 60 (6.2%) 941 (96.2%) 951 (97.2%) 8 (0.8%) 959 (98.1%)
Hymenoptera BUSCO genes (n,%) 4088 (92.6%) 222 (5.0%) 4310 (97.6%) 4322 (97.9%) 15 (0.4%) 4337 (98.3%)