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Table 2 Number of failed, polymorphic and total SNPs in the assay

From: Genomic tools for durum wheat breeding: de novo assembly of Svevo transcriptome and SNP discovery in elite germplasm

 

SNPs in assay

Failed SNPs

Polymorphic SNPs

T. aestivum SNP

73,647

4782 (6.5%)

20,807 (30.2%)

T. durum SNP

7940

703 (8.8%)

3738 (51.7%)

Total

81,587

5485 (6.7%)

24,545 (32.3%)

  1. Informativeness of T. aestivum and T. durum SNPs included in the iSelect Illumina wheat 90 K SNP array as evaluated on a panel of 288 worldwide durum wheat elite germplasm accessions. Percentage of polymorphic SNPs is based on the number of successful SNPs