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Table 2 The top 10 candidate reference genes in the early development, adult tissues and gonadal development of the scallop M. yessoensis

From: Systematic identification and validation of the reference genes from 60 RNA-Seq libraries in the scallop Mizuhopecten yessoensis

 

Gene ID

Gene Symbol

Gene Name

CV

Mean

Early Development

PYT09804

–

–

0.016

9.68

PYT05988

ATPK

Putative ATP synthase subunit f

0.024

10.65

PYT22252

ATP5J

ATP synthase-coupling factor 6

0.025

10.58

PYT08134

SELR1

Sel1 repeat-containing protein 1

0.025

5.48

PYT07181

–

–

0.025

8.22

PYT20584

TBB4B

Tubulin beta-4B

0.026

7.88

PYT12567

–

–

0.026

10.23

PYT01876

ATP5L

ATP synthase subunit g

0.026

10.72

PYT08398

NDUAB

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex

0.027

8.83

PYT17204

–

–

0.027

10.60

Adult Tissues

PYT25527

RL21

60S ribosomal protein L21

0.030

12.08

PYT22182

RL40

Ubiquitin-60S ribosomal protein L40

0.031

11.85

PYT16215

RS23

40S ribosomal protein S23

0.032

11.15

PYT05179

RS2

40S ribosomal protein S2

0.032

11.38

PYT03250

RL8

60S ribosomal protein L8

0.032

11.60

PYT05293

RS24

40S ribosomal protein S24

0.032

11.56

PYT21874

RS20

40S ribosomal protein S20

0.032

11.81

PYT12227

RS3

40S ribosomal protein S3

0.032

11.54

PYT19800

RL27

60S ribosomal protein L27

0.033

11.73

PYT23759

RL19

60S ribosomal protein L19

0.033

11.89

Gonadal Development

PYT16215

RS23

40S ribosomal protein S23

0.012

11.30

PYT23375

EF1A

Elongation factor 1-alpha

0.013

13.74

PYT15332

NDUS4

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4

0.014

8.51

PYT24062

RLA1

60S acidic ribosomal protein P1

0.017

13.36

PYT20779

IF4A1

Eukaryotic initiation factor 4A-I

0.018

10.28

PYT10011

LARK

RNA-binding protein lark

0.018

9.31

PYT14375

SMD1

Small nuclear ribonucleoprotein Sm D1

0.019

10.89

PYT01777

RM54

39S ribosomal protein L54

0.019

5.76

PYT24327

CSN8

COP9 signalosome complex subunit 8

0.019

7.23

PYT10755

CYP1

Peptidyl-prolyl cis-trans isomerase 1

0.020

9.86

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BMC Genomics

ISSN: 1471-2164

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