Disruption of the pleiotropic gene scoC causes transcriptomic and phenotypical changes in Bacillus pumilus BA06

Table 1 Relative expression level (TPM) of the protease genes of the scoC mutant (∆scoC) and the wild-type (wt) strain of B. pumilus BA06 across three time-points

Gene ID	Gene	Protein	B. pumilus (wt)			∆scoC mutant
Gene ID	Gene	Protein	12 h	24 h	36 h	12 h	24 h	36 h
CDS0232	wprA	Cell wall-associated protease	121	72	127	120	140	144
CDS0246	epr	Minor extracellular protease	58	50	47	45	40	33
CDS0935	aprE	Subtilisin E	10,201	5730	11,622	27,522^a	53,512^a	33,455^a
CDS1190	isp	Major intracellular protease	10,281	2299	6415	3490^a	5368^a	8946
CDS1401	bpr	Bacillopeptidase F	439	233	597	282	499^a	353
CDS1594	aprX	Serine protease AprX	386	16	55	24^a	388^a	1002^a
CDS2061	aprN	Subtilisin NAT	274	188	292	61^a	42^a	51^a
CDS3474	vpr	Minor extracellular protease	390	465	484	297	218	199

ISSN: 1471-2164