Table 2 Comparison of polymorphic status of loci in the sequenced pools to actual polymorphism in the collection
From: Genetic diversity of avocado (Persea americana Mill.) germplasm using pooled sequencing
Pool | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Guatemalan | Mexican | West Indian | |||||||||
Accessions | AA | AB | BB | NA | AA | AB | BB | NA | AA | AB | BB | NA |
AA | 1 | 13 | 1 | 1 | 2 | 14 | 0 | 12 | 1 | 9 | 0 | 1 |
AB | 1 | 151 | 0 | 9 | 7 | 130 | 6 | 9 | 15 | 126 | 18 | 4 |
BB | 0 | 1 | 0 | 3 | 0 | 1 | 6 | 3 | 0 | 3 | 1 | 3 |
NA | 0 | 11 | 0 | 0 | 0 | 11 | 0 | 1 | 1 | 9 | 1 | 0 |
True positive percentage | 50% | 86% | 0% | 0% | 22% | 83% | 50% | 4% | 6% | 86% | 5% | 0% |