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Table 4 Prediction of kinase fusion events at different dilution levels

From: Comprehensive kinome NGS targeted expression profiling by KING-REX

KARPAS 299

(ALK)

U-118 MG

(ROS1)

Kinase

FC

P-value

IN_A

IN_B

OUT_A

OUT_B

Class

100.0

0.0

ALK

15.8

2.00E-308

12.8

12.9

0.0

0.0

TP

87.5

12.5

ALK

6.5

0

13.0

12.8

6.4

6.3

TP

87.5

12.5

ROS1

7.4

3.46E-078

7.7

7.6

1.6

0.0

TP

75.0

25.0

ALK

5.3

3.11E-124

12.6

12.8

7.5

7.2

TP

75.0

25.0

ROS1

6.8

1.60E-075

8.7

8.7

0.0

3.0

TP

50.0

50.0

ROS1

9.6

3.09E-194

9.8

9.8

0.0

1.6

TP

50.0

50.0

ALK

3.7

5.46E-105

12.2

12.1

8.5

8.3

TP

25.0

75.0

ROS1

10.3

6.40E-167

10.6

10.3

0.0

1.6

TP

25.0

75.0

ALK

2.35

6.75E-028

11.25

11.36

8.68

9.13

FN

12.5

87.5

ROS1

11.3

2.49E-152

10.7

10.7

1.0

0.0

TP

12.5

87.5

ALK

1.40

2.17E-015

10.95

10.77

9.31

9.34

FN

0.0

100.0

ROS1

13.9

4.58E-174

10.9

10.7

0.0

0.0

TP

  1. Imbalanced 5′ and 3′ kinase signals detected by KING-REX analysis in different dilution mixtures of KARPAS 299 and U-118 MG cell lines. (FC = Log2 fold change between ASSAY IN and ASSAY OUT; IN = ASSAY IN expression value for duplicates A and B; OUT = ASSAY OUT expression value for duplicates A and B)