Table 3 Distribution of Trichoderma genes in sections, clades and species
From: Evolution and comparative genomics of the most common Trichoderma species
Clade | Species | Present in | Absent from | Total: | ||||
|---|---|---|---|---|---|---|---|---|
All clusters with at least one gene from Trichoderma | At least two species from each clade | the clade only | SL | HV | ST | |||
13,089 | 7923 | 80/745/286 | 1083 | 68 | 335 | |||
SL | T. reesei | 8775 | 8176 | 80 | Â | 38 | 232 | 8526 |
T. longibrachiatum | 8636 | 7951 | 80 | Â | 46 | 249 | 8326 | |
T. citrinoviride | 9205 | 8436 | 81 | Â | 48 | 275 | 8840 | |
T. parareesei | 8757 | 8105 | 81 | Â | 37 | 234 | 8457 | |
HV | T. harzianum T | 12737 | 9419 | 778 | 1038 | Â | 300 | 11535 |
T. harzianum | 12698 | 9392 | 763 | 1016 | Â | 296 | 11467 | |
T. guizhouense | 10996 | 9036 | 533 | 826 | Â | 230 | 10625 | |
T. afroharzianum | 10811 | 8802 | 500 | 867 | Â | 232 | 10401 | |
T. virens | 11474 | 9341 | 410 | 875 | Â | 276 | 10902 | |
ST | T. atroviride | 10738 | 9009 | 267 | 841 | 54 | Â | 10171 |
T. gamsii | 10039 | 8501 | 267 | 780 | 31 | Â | 9579 | |
T. asperellum | 10595 | 8886 | 266 | 839 | 47 | Â | 10038 | |
T. hamatum | 10164 | 8694 | 241 | 833 | 29 | Â | 9797 | |