Table 2 Genome sequencing data and quality of each sample
Sample | Raw Base (bp) | Clean Base(bp) | Effective Rate(%) | Error Rate(%) | Q20(%) | Q30(%) | GC Content(%) |
|---|---|---|---|---|---|---|---|
c1 | 7,062,951,300 | 7,049,850,900 | 99.81 | 0.04 | 96.20 | 90.28 | 41.89 |
c2 | 5,863,885,800 | 5,846,086,200 | 99.70 | 0.04 | 96.45 | 90.91 | 41.99 |
c3 | 5,782,930,200 | 5,770,443,900 | 99.78 | 0.04 | 96.59 | 91.13 | 41.95 |
m1 | 6,310,089,300 | 6,294,106,500 | 99.75 | 0.04 | 96.46 | 90.88 | 41.99 |
m2 | 6,472,890,300 | 6,459,912,300 | 99.80 | 0.04 | 96.59 | 91.12 | 41.64 |
m3 | 6,625,437,000 | 6,594,946,500 | 99.54 | 0.04 | 96.21 | 90.34 | 42.05 |
m4 | 6,345,791,100 | 6,330,096,600 | 99.75 | 0.04 | 96.30 | 90.50 | 41.97 |
m5 | 6,039,080,700 | 6,017,527,500 | 99.64 | 0.05 | 94.90 | 87.09 | 42.02 |
m6 | 6,755,125,800 | 6,715,168,200 | 99.41 | 0.04 | 96.50 | 94.72 | 42.10 |
m7 | 6,306,369,000 | 6,287,940,000 | 99.71 | 0.04 | 96.52 | 90.95 | 41.94 |
m8 | 5,902,783,200 | 5,886,753,900 | 99.73 | 0.04 | 97.32 | 93.14 | 41.42 |