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Table 4 SNP information for control and ARTP treated samples after calling

From: Novel breeding approach for Japanese flounder using atmosphere and room temperature plasma mutagenesis tool

Sample Upstream Exonic Intronic Splicing Downstream upstream/downstream Intergenic Total ts tv ts/tv
c1 116,469 116,181 1,356,072 272 101,018 5849 1,393,467 3,089,328 1,676,361 1,412,967 1.186
c2 106,347 109,337 1,241,373 250 92,833 5258 1,273,066 2,828,464 1,537,682 1,290,782 1.191
c3 105,941 108,654 1,239,371 262 92,870 5236 1,269,953 2,822,287 1,534,177 1,288,110 1.191
m1 109,996 112,412 1,288,306 263 95,991 5487 1,321,804 2,934,259 1,595,108 1,339,151 1.191
m2 112,947 111,782 1,314,387 259 98,438 5714 1,351,103 2,994,630 1,623,581 1,371,049 1.184
m3 113,352 114,531 1,317,274 272 98,624 5595 1,352,071 3,001,719 1,630,355 1,371,364 1.188
m4 111,372 112,731 1,296,977 270 96,508 5583 1,326,500 2,949,941 1,601,682 1,348,259 1.187
m5 107,632 109,741 1,263,174 254 94,376 5404 1,292,999 2,873,580 1,560,292 1,313,288 1.188
m6 115,586 116,261 1,347,778 276 100,946 5744 1,382,047 3,068,638 1,666,239 1,402,399 1.188
m7 109,894 111,811 1,286,623 269 96,192 5416 1,320,482 2,930,687 1,592,922 1,337,765 1.19
m8 108,839 105,835 1,265,898 243 95,682 5439 1,301,310 2,883,246 1,562,074 1,321,172 1.182