Table 2 Identification of protein-coding genes based on the additive genetic variance (Var) explained by 1 Mb windows of adjacent SNPs

SSC2^a

4,239,252-5,222,613

KDM2A, RHOD, C2H11orf86, SYT12, PC, RCE1, C2H11orf80, CCDC87, CCS, CTSF, ACTN3, ZDHHC24, BBS1, DPP3, PELI3, MRPL11, NPAS4, SLC29A2, B4GAT1, BRMS1, RIN1, CD248, TMEM151A, YIF1A, CNIH2, RAB1B, KLC2, PACS1, SF3B2

SSC2

145,012,848-146,011,865

SPOCK1, KLHL3, HNRNPA0, LOC100517462, MYOT, PKD2L2, LOC100520183, FAM13B, WNT8A, NME5, BRD8, KIF20A, CDC23, GFRA3, CDC25C, SLBP2

SSC3^a

3,981,003-4,980,011

SDK1, FOXK1, AP5Z1, RADIL, PAPOLB, MMD2, WIPI2, SLC29A4, TNRC18, FBXL18, ACTB, FSCN1, RNF216

SSC4

20,774,634-21,762,434

COLEC10, TNFRSF11B, SAMD12, EXT1

SSC4

104,642,633-105,640,667

SLC39A1, CRTC2, DENND4B, GATAD2B, SLC27A3, INTS3, NPR1, ILF2, SNAPIN, CHTOP, S100A5, S100A4, S100A3, S100A2, S100A16, S100A14, S100A13, PPGRP-S, S100A9, S100A12, S100A8, LOC102161828, S100A7, PGLYRP3, LOR, PRR9, LELP1, SPRR2E, LOC100737840, SPRR1A, SPRP, IVL, SMCP, KPRP

SSC11

25,254,733-26,232,874

TNFSF11, AKAP11, DGKH, VWA8, RGCC, NAA16

SSC12

54,066,400-55,065,792

GP1BA, MINK1, PLD2, ZMYND15, CXCL16, MED11, ARRB2, PSMB6, GLTPD2, VMO1, TM4SF5, PELP1, ALOX15, SLC16A11, SLC16A13, BCL6B, C12H17orf49, RNASEK, ALOX12, CLEC10A, ASGR2, SLC2A4, CLDN7, ELP5, GABARAP, PHF23, DVL2, DLG4, YBX2, NEURL4, ACAP1, KCTD11, TMEM95, TNK1, PLSCR3, POLR2A, SLC35G6, ZBTB4, CHRNB1, FGF11, TMEM102, SPEM2, DNAH2

SSC12^a

56,619,955-57,608,007

CCDC42, MFSD6L, PIK3R6, PIK3R5, NTN1, STX8, CFAP52, USP43, DHRS7C, GSG1L2, GLP2R, RCVRN, GAS7

SSC13

3,171,064-4,162,557

BTD, ANKRD28, GALNT15, DPH3, OXNAD1, RFTN1, DAZL

SSC13

10,788,202-11,761,268

UBE2E2

SSC14

13,059,455-14,032,461

SCARA5, NUGGC, ELP3, PNOC, ZNF395, FBXO16, FZD3, EXTL3, INTS9, HMBOX1, KIF13B

SSC15

55,188,321-56,161,595

FGFR1, LETM2, NSD3, PLPP5, DDHD2, BAG4, ADRB3, STAR, ASH2L, EIF4EBP1, LSM1, BRF2, ADGRA2, PLPBP, ERLIN2, ZNF703, KCNU1

SSC15

57,551,770-58,532,159

–

SSC15

131,996,123-132,969,736

TNS1, RUFY4, CXCR2, CXCR1

SSC16

77,028,962-78,013,471

GLRA1, G3BP1, ATOX1, LOC100514500, SPARC, FAT2, SLC36A1, SLC36A2, SLC36A3, GM2A, CCDC69, ANXA6

SSC17^a

17,325,007-18,300,615

BMP2