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Fig. 4 | BMC Genomics

Fig. 4

From: A high-density genetic map developed by specific-locus amplified fragment (SLAF) sequencing and identification of a locus controlling anthocyanin pigmentation in stalk of Zicaitai (Brassica rapa L. ssp. chinensis var. purpurea)

Fig. 4

LOD scores along the 10 chromosomes for variation of the purple stalk trait. The horizontal ordinate is the order of markers in the linkage group. The upward vertical ordinate is the LOD value. The downward vertical ordinate is the phenotypic contribution rate. Curves in the plot indicate the genetic coordinate and LOD score (top) of the detected QTLs. The box inset shows qBrps2 and the zoom-in view of the peak on Chr07 and the imaginary line indicates the LOD for genome wide significances for the purple stalk trait. The blue line is the LOD value corresponding to the marker; the red line is the phenotyic contribution rate corresponding to the marker; the gray line is the threshold line. The area above the threshold is the associated QTL area

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BMC Genomics

ISSN: 1471-2164

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