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Fig. 7 | BMC Genomics

Fig. 7

From: Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus

Fig. 7

Comparisons of the number of similar transcripts in the starting organism that are uniquely mapped (unique) or translocated (transloc) as reported by GMAP and recovered by Oases and Trans-ABySS to the ones recovered by extVelvet and extABySS respectively for different values of k and k-mer coverage cutoff c. The number in parentheses is the ratio of the number of translocated transcripts to the number of uniquely mapped transcripts

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BMC Genomics

ISSN: 1471-2164

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