Skip to main content

Table 1 List of Two-Component-System associated proteins found in the genome of M. truncatula

From: Diversification of cytokinin phosphotransfer signaling genes in Medicago truncatula and other legume genomes

Locus tag

Previous protein name

Protein name

Length (AA)

Arabidopsis homolog

Domains

v4.0a

v5.0b

Histidine kinases

Medtr5g097410

MtrunA17Chr5g0447641

 

MtCHK4c

1270

AHK2

CHASE

 

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr3g085130

MtrunA17Chr3g0122391

 

MtCHK3c

1035

AHK3

CHASE

 

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr8g080770

MtrunA17Chr8g0377481

 

MtCHK2c

971

AHK3

CHASE

 

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr8g106150

MtrunA17Chr8g0392301

CRE1

MtCHK1c

1004

AHK4

CHASE

 

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr2g067240

MtrunA17Chr2g0311191

 

MtCHK5

256

AHK4-like

CHASE

 

His (H)

Medtr5g022470

MtrunA17Chr5g0405701

 

MtHK1

1201

AHK1

  

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr8g075340

MtrunA17Chr8g0371601

 

MtHK2

1174

AHK1

  

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr1g090850

MtrunA17Chr1g0197591

 

MtHK3

1051

CKI1

  

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr1g087140

MtrunA17Chr1g0194741

 

MtHK4

1103

CKI1

  

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr3g105590

MtrunA17Chr3g0136601

 

MtHK5

950

CKI2 / AHK5

  

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr1g013360

MtrunA17Chr1g0150511

 

MtHK6

1013

CKI2 / AHK5

  

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr1g014670

MtrunA17Chr1g0150531

 

MtHK7

390

CKI2 / AHK5

  

His (H)

Medtr4g031150

MtrunA17Chr4g0013831

 

MtETR1

791

ETR1

EBD (D,Y, I1,P, I2, C, H)

GAF

His (H)

HATPase_c (N, G1, F, G2)

Rec (D)

Medtr7g109150

MtrunA17Chr7g0269631

 

MtETR2

636

ERS1

EBD (D,Y, I1,P, I2, C, H)

GAF

His (H)

HATPase_c (N, G1, F, G2)

Medtr1g044210

MtrunA17Chr1g0168161

 

MtETR3

761

ETR2

EBD (D,Y, I1,P, I2, C, H)

GAF

His (−)

HATPase_c (−, −, −, −)

Rec (D)

Medtr1g073840

MtrunA17Chr1g0186431

 

MtETR4

760

ETR2

EBD (D,Y, I1,P, I2, C, H)

GAF

His (−)

HATPase_c (−, G1, −, −)

Rec (D)

Medtr1g079790

MtrunA17Chr1g0190021

 

MtETR5

763

EIN4

EBD (D,Y, I1,P, I2, C, H)

GAF

His (H)

HATPase_c (−, G1, −, G2)

Rec (D)

Medtr7g116330

MtrunA17Chr7g0274831

 

MtETR6

766

EIN4

EBD (D,Y, I1,P, I2, C, H)

GAF

His (H)

HATPase_c (−, G1, −, G2)

Rec (D)

Phosphorelay-proteins

Medtr1g082290

MtrunA17Chr1g0191351

 

MtHPT2d

152

 

Hpt (H)

    

Medtr1g089130

MtrunA17Chr1g0196361

 

MtHPT3

149

 

Hpt (H)

    

Medtr2g020770

MtrunA17Chr2g0286781

 

MtHPT1d

148

 

Hpt (H)

    

Medtr2g100880

MtrunA17Chr2g0331011

 

MtHPT4

150

 

Hpt (H)

    

Medtr2g100900

MtrunA17Chr2g0331021

 

MtHPT5

150

 

Hpt (H)

    

Medtr7g114020

MtrunA17Chr7g0273321

 

MtHPT8

147

 

Hpt (H)

    

Medtr4g010160

MtrunA17Chr4g0003251

 

MtHPT7

169

 

Hpt (N)

    

Medtr2g103870

MtrunA17Chr2g0333131

 

MtHPT6

158

 

Hpt (N)

    

Medtr2g085155

NA

 

MtHPT9

151

 

Hpt (R)

    

Medtr2g086010

NA

 

MtHPT10

151

 

Hpt (R)

    

RRAs

Medtr1g049100

MtrunA17Chr1g0170741

 

MtRRA1

198

 

Rec (D)

    

Medtr3g015490

MtrunA17Chr3g0082861

RR9e

MtRRA9

164

 

Rec (D)

    

Medtr3g078613

MtrunA17Chr3g0118211

 

MtRRA2

201

 

Rec (D)

    

Medtr3g088630

MtrunA17Chr3g0124861

 

MtRRA3

235

 

Rec (D)

    

Medtr3g093860

MtrunA17Chr3g0128691

 

MtRRA6

156

 

Rec (D)

    

Medtr4g106590

MtrunA17Chr4g0059571

RR8e

MtRRA8

215

 

Rec (D)

    

Medtr5g036480

MtrunA17Chr5g0414931

RR4d

MtRRA4

237

 

Rec (D)

    

Medtr6g007460

MtrunA17Chr4g0021731

 

MtRRA7

184

 

Rec (D)

    

Medtr7g490310

MtrunA17Chr7g0256551

RR5d

MtRRA5

239

 

Rec (D)

    

Medtr8g038620

MtrunA17Chr8g0352871

RR11e

MtRRA11

177

 

Rec (D)

    

RRBs

Medtr1g032570

MtrunA17Chr1g0161431

 

MtRRB7

623

 

Rec (D)

Myb

C-ter (371 AA)

 

Medtr2g034960

MtrunA17Chr2g0294911

 

MtRRB6

595

 

Rec (D)

Myb

C-ter (343 AA)

 

Medtr2g450070

MtrunA17Chr2g0304841

 

MtRRB5

666

 

Rec (D)

Myb

C-ter (401 AA)

 

Medtr3g086100

MtrunA17Chr3g0123131

 

MtRRB4

570

 

Rec (D)

Myb

C-ter (319 AA)

 

Medtr3g102590

MtrunA17Chr3g0134461

 

MtRRB10

240

 

Rec (D)

Myb

C-ter (53 AA)

 

Medtr3g106220

MtrunA17Chr3g0137101

RR3d

MtRRB3

645

 

Rec (D)

Myb

C-ter (395 AA)

 

Medtr4g021760

MtrunA17Chr4g0009851

 

MtRRB11

312

 

Rec (D)

Myb

C-ter (91 AA)

 

Medtr4g021790

MtrunA17Chr4g0009901

 

MtRRB12

274

 

Rec (D)

Myb

C-ter (54 AA)

 

Medtr4g021845

MtrunA17Chr4g0009981

 

MtRRB13

311

 

Rec (D)

Myb

C-ter (91 AA)

 

Medtr4g021855

MtrunA17Chr4g0010001

 

MtRRB14

300

 

Rec (D)

Myb

C-ter (81 AA)

 

Medtr4g023980

MtrunA17Chr4g0011071

 

MtRRB15

201

 

Rec (D)

Myb

C-ter (2 AA)

 

Medtr4g121020

MtrunA17Chr4g0067981

RR2d

MtRRB2

680

 

Rec (D)

Myb

C-ter (414 AA)

 

Medtr4g131570

MtrunA17Chr4g0074401

 

MtRRB16

608

 

Rec (D)

Myb

C-ter (341 AA)

 

Medtr4g131580

MtrunA17Chr4g0074411

 

MtRRB17

608

 

Rec (D)

Myb

C-ter (355 AA)

 

Medtr4g131600

MtrunA17Chr4g0074421

 

MtRRB18

590

 

Rec (D)

Myb

C-ter (337 AA)

 

Medtr5g055260

MtrunA17Chr5g0423031

 

MtRRB19

268

 

Rec (D)

Myb

C-ter (65 AA)

 

Medtr8g079940

MtrunA17Chr8g0376881

 

MtRRB20

538

 

Rec (D)

Myb

C-ter (277 AA)

 

Medtr3g102600

MtrunA17Chr3g0134481

RR1d

MtRRB1

228

 

Rec (E)

Myb

C-ter (56 AA)

 

Medtr4g098870

MtrunA17Chr4g0054981

 

MtRRB24

586

 

Rec (E)

Myb

C-ter (193 AA)

 

Medtr5g014040

MtrunA17Chr5g0400241

 

MtRRB9

543

 

Rec (E)

Myb

C-ter (180 AA)

 

Medtr6g045327

MtrunA17Chr6g0471041

 

MtRRB25

362

 

Rec (E)

Myb

C-ter (102 AA)

 

Medtr7g026400

MtrunA17Chr7g0223971

 

MtRRB26

592

 

Rec (E)

Myb

C-ter (393 AA)

 

Medtr8g032710

MtrunA17Chr8g0350761

 

MtRRB8

476

 

Rec (E)

Myb

C-ter (203 AA)

 

Medtr8g105600

MtrunA17Chr8g0391911

 

MtRRB27

764

 

Rec (E)

Myb

C-ter (519 AA)

 

Medtr0450s0040

MtrunA17Chr6g0473731

 

MtRRB28

537

 

Rec (E)

Myb

C-ter (316 AA)

 

Medtr6g016850

MtrunA17Chr6g0456631

 

MtRR31

171

 

Rec (E)

C-ter (AA)

 

Medtr8g093040

MtrunA17Chr8g0383961

 

MtRR32

264

 

Rec (E)

C-ter (AA)

 

Medtr1g013160

MtrunA17Chr1g0149831

 

MtRRB29

326

 

Rec (N)

Myb

C-ter (53 AA)

 

Medtr1g013170

MtrunA17Chr1g0149841

 

MtRRB21

497

 

Rec (N)

Myb

C-ter (254 AA)

 

Medtr1g013180

MtrunA17Chr1g0149851

 

MtRRB22

530

 

Rec (N)

Myb

C-ter (287 AA)

 

Medtr7g117705

MtrunA17Chr7g0275891

 

MtRRB23

336

 

Rec (N)

Myb

C-ter (93 AA)

 

NA

NA

 

MtRRB30

293

 

Rec (N)

Myb

C-ter (49 AA)

 

Clock-RRs

Medtr1g067110

MtrunA17Chr1g0181811

 

MtPRR1

744

 

Rec (E)

CCT

  

Medtr3g037390

MtrunA17Chr3g0091641

 

MtPRR2

575

 

Rec (E)

CCT

  

Medtr3g092780

MtrunA17Chr3g0127941

 

MtPRR3

685

 

Rec (E)

CCT

  

Medtr4g061360

MtrunA17Chr4g0030271

 

MtPRR4

796

 

Rec (E)

CCT

  

Medtr4g108880

MtrunA17Chr4g0061021

 

MtPRR5

630

 

Rec (E)

CCT

  

Medtr7g118260

MtrunA17Chr7g0276361

 

MtPRR6

559

 

Rec (E)

CCT

  

Medtr8g024260

MtrunA17Chr8g0345901

 

MtPRR7

585

 

Rec (E)

CCT

  
  1. For each gene, the current protein name, as well as a previously published name when available, the protein length, the A. thaliana most closely related protein, and the conserved protein domains are listed. a [73], b [74], c [55], d [51] and e [56]. NA: Not Annotated