Table 1 Summary of Analysis Performed and sequence dataset used
Type of analysis | Sequence data set used |
|---|---|
Shimodaira-Hasegawa test | 80 whole genomes of currently known Gamma-HPVs |
Recombination analysis | 80 whole genomes of currently known Gamma-HPVs |
Construction of a time-scaled HPV phylogeny | 214 L1 nucleotide sequences of mostly HPV sequences and 2 avian PVs, one turtle PV and one bovine PV |