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Table 1 Sequenced chickens and the number of SNPs detected from different breeds

From: A new chicken 55K SNP genotyping array

Type Breeds Individuals in each poola No. of pools Number of detected SNPs (with QC ≥ 20)b
Local Yellow-feathered chicken Beijing-You 16 3 8,505,214
Jingxing-Huang 16 3 8,349,627
Sanhuang 16 3 9,405,319
Cyan shank partridge Cyan shank partridge (fast growth rate) 16 3 8,954,795
Cyan shank partridge (mediate growth rate) 16 3 8,884,232
Commercial white-feathered Cobb maternal line 16 3 7,093,225
Cobb paternal line 16 3 8,372,769
Recessive White 16 3 7,556,464
  Total    15,312,402
  1. aEach pool contained 8 males and 8 females
  2. bBased on Gallus_gallus-4.0