Table 1 Sequenced chickens and the number of SNPs detected from different breeds
Type | Breeds | Individuals in each poola | No. of pools | Number of detected SNPs (with QC ≥ 20)b |
|---|---|---|---|---|
Local Yellow-feathered chicken | Beijing-You | 16 | 3 | 8,505,214 |
Jingxing-Huang | 16 | 3 | 8,349,627 | |
Sanhuang | 16 | 3 | 9,405,319 | |
Cyan shank partridge | Cyan shank partridge (fast growth rate) | 16 | 3 | 8,954,795 |
Cyan shank partridge (mediate growth rate) | 16 | 3 | 8,884,232 | |
Commercial white-feathered | Cobb maternal line | 16 | 3 | 7,093,225 |
Cobb paternal line | 16 | 3 | 8,372,769 | |
Recessive White | 16 | 3 | 7,556,464 | |
| Â | Total | Â | Â | 15,312,402 |