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Table 1 Comparison between overall changes in RNA transcripts and proteins using a log2FC of > 0.65 or < − 0.65

From: Comparative analyses of the variation of the transcriptome and proteome of Rhodobacter sphaeroides throughout growth

RNA transcripts (microarray)

 

trans

stat28h

out 28 h 20′

out 28 h 90’

stat 72 h

out 72 h 20′

out 72 h 90’

Sum

Total number

4285

4357

4283

4290

4356

4189

4191

29,951

Total changed log2FC (<− 0.65 or > 0.65)

397

175

353

275

265

1117

910

3492

Percentage

9.26%

4.02%

8.24%

6.41%

6.08%

26.67%

21.71%

11.66%

Up (> 0.65)

84

55

56

40

92

583

415

1325

Percentage up

1.96%

1.26%

1.31%

0.93%

2.11%

13.92%

9.90%

4.42%

Down (<−0.65)

313

120

297

235

173

534

495

2167

Percentage down

7.30%

2.75%

6.93%

5.48%

3.97%

12.75%

11.81%

7.24%

Proteins

 

trans

stat 28 h

out 28 h

stat 72 h

out 72

stat 144 h

out 144 h

Sum

Total number

1986

2115

2141

2012

2056

1877

1872

14,059

Total changed log2FC (<−0.65 or > 0.65)

471

599

427

886

864

1028

947

5222

Percentage

23.72%

28.32%

19.94%

44.04%

42.02%

54.77%

50.59%

37.14%

Up (> 0.65)

346

318

212

500

436

579

544

2935

Percentage up

17.42%

15.04%

9.90%

24.85%

21.21%

30.85%

29.06%

20.88%

Down (<−0.65)

125

281

215

386

428

449

403

2287

Percentage down

6.29%

13.29%

10.04%

19.18%

20.82%

23.92%

21.53%

16.27%