Skip to main content

Table 2 Enrichment analysis of the yeast dataset for the top 15 most connected clusters

From: A hypergraph-based method for large-scale dynamic correlation study at the transcriptomic scale

Group label Group size Hyperedges involved GOBPID Term P-value
5 180 432 GO:0005979 regulation of glycogen biosynthetic process 1.34E-03
    GO:0016052 carbohydrate catabolic process 5.17E-03
28 46 85 GO:0032543 mitochondrial translation 2.28E-03
    GO:0072329 monocarboxylic acid catabolic process 6.64E-03
2 237 82 GO:0030154 cell differentiation 2.15E-03
    GO:0030435 sporulation resulting in formation of a cellular spore 5.63E-03
21 60 69 GO:0006259 DNA metabolic process 1.10E-09
    GO:1903047 mitotic cell cycle process 7.00E-06
12 114 61 GO:0022613 ribonucleoprotein complex biogenesis 4.25E-13
    GO:0034660 ncRNA metabolic process 1.97E-10
7 168 59 GO:0005996 monosaccharide metabolic process 7.62E-03
34 38 55 GO:0016236 macroautophagy 4.56E-03
    GO:0048193 Golgi vesicle transport 9.15E-03
22 59 52 GO:0055114 oxidation-reduction process 3.84E-05
    GO:0071822 protein complex subunit organization 2.70E-04
32 41 48 GO:0042254 ribosome biogenesis 2.77E-15
    GO:0034470 ncRNA processing 1.02E-09
53 20 48 GO:0032465 regulation of cytokinesis 1.28E-03
    GO:0045839 negative regulation of mitotic nuclear division 9.30E-03
31 43 40 GO:0000278 mitotic cell cycle 5.15E-07
    GO:0007010 cytoskeleton organization 3.73E-04
45 28 39 GO:0016054 organic acid catabolic process 1.21E-03
    GO:0015074 DNA integration 2.56E-03
29 44 36 GO:0034637 cellular carbohydrate biosynthetic process 2.43E-03
    GO:0055114 oxidation-reduction process 6.09E-03
14 96 35 GO:0006412 translation 1.64E-32
    GO:0022613 ribonucleoprotein complex biogenesis 2.99E-16
18 75 35 GO:0007030 Golgi organization 5.04E-04
    GO:0051784 negative regulation of nuclear division 2.15E-03
  1. For each cluster, the enriched term that include the most number of genes in the cluster is shown