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Fig. 3 | BMC Genomics

Fig. 3

From: Identifying genetic determinants of complex phenotypes from whole genome sequence data

Fig. 3

Effect of chunk size on the distribution of importance of sites for the RRF algorithm. The genes and sites identified as genetic determinants of influenza phenotypes are shown for: a infectivity, b transmissibility, and c pathogenicity. Only results for the smallest (80 amino acids), intermediate (125), and largest (175) chunk sizes are shown. Only the most important sites (Gini index in top 90th percentile of its distribution over all the sites) are shown in each panel, with sites backed by with experimental evidence highlighted in red. Insets show the whole distribution of importance values (left and right columns), and the Venn diagrams of the most important sites at all three chunk size (middle column)

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