Fig. 4
From: Genome-wide RNA pol II initiation and pausing in neural progenitors of the rat
Pol II pausing across the rat genome. a. Scatter plot showing the distribution of TSS-RNA versus RNA-seq FPKM signal for all genes, with pausing index indicated by color. c. Metaplot of TSS-RNA 3′-ends relative to the reannotated TSS. b. Metaplot of TSS-RNA lengths around the TSSs. All RNAs on the sense strand from a gene within +/− 150 bp interval were considered regardless of their initiation site. All genes versus top 25% highest expressed genes (based on RNA-seq signal FPKM) are shown, respectively, in grey and dark red. d. A UCSC browser shot showing Pol II pausing and transcription on Fabp7 gene, which has the highest expression in rat neural progenitors based on RNA-seq analysis. Inset shows a zoomed-in view of the gene’s promoter region