Table 3 The immune responses related DEGs and partial validation of RNA sequencing data by qRT-PCR
Gene ID | Gene name | Function annotation | FC log2(B2/N) | |
|---|---|---|---|---|
RNA-Seq | qRT-PCR | |||
Down-regulated | ||||
 NC_030809.1_gene90 | C1QA | complement C1q subcomponent subunit A | −3.03 |  |
 NC_030809.1_gene93 | C1QB | complement C1q subcomponent subunit B | −2.29 |  |
 NC_030809.1_gene91 | C1QC | complement C1q subcomponent subunit C | −1.42 |  |
 NC_030814.1_gene546 | CFD | complement factor D | −2.35 |  |
 NC_030812.1_gene428 | S-LE | lysozyme | −3.03 |  |
 NC_030836.1_gene709 | IFITM3 | interferon-induced transmembrane protein 3 | −1.36 |  |
 NC_030834.1_gene266 | LOC102188015 | beta-defensin 103A | −1.05 | −0.5 |
 NC_030810.1_gene1245 | S100A4 | protein S100-A4 | −1.76 |  |
 NC_030808.1_gene1009 | S100B | protein S100-B | −1.23 |  |
 NC_030818.1_gene1111 | FCN1 | ficolin-1 | −1.56 |  |
 NC_030818.1_gene586 | ANXA4 | annexin A4 | −1.54 | −0.7 |
 NC_030813.1_gene593 | ANXA3 | annexin A3 | −1.49 | −0.9 |
 NC_030817.1_gene452 | ANXA2 | annexin A2 | −1.29 | −1.9 |
 NC_030826.1_gene194 | CCL2 | C-C motif chemokine 2 | −1.61 | −2.2 |
Up-regulated | ||||
 NC_030828.1_gene424 | NFKBIA | NF-kappa-B inhibitor alpha | 1.27 | 1.3 |
 NC_030836.1_gene157 | LOC102168428 | serum amyloid A protein | 1.31 | 2.2 |
 NC_030836.1_gene161 | LOC100860781 | serum amyloid A3 | 1.62 |  |
 NC_030826.1_gene156 | CCL3 | C-C motif chemokine 3 | 1.48 | 1.5 |
 NC_030825.1_gene308 | CCL22 | C-C motif chemokine 22 | 1.48 |  |
 NC_030826.1_gene155 | CCL4 | C-C motif chemokine 4 | 1.95 | 1.8 |
 NC_030826.1_gene163 | CCL5 | C-C motif chemokine 5 | 1.80 | 1.6 |
 NC_030809.1_gene360 | CCL20 | C-C motif chemokine 20 | 3.12 | 2.7 |
 NC_030813.1_gene567 | CXCL10 | C-X-C motif chemokine 10 | 1.16 | 1.2 |
 NC_030814.1_gene1059 | ICAM1 | intercellular adhesion molecule 1 | 1.54 |  |
 NC_030830.1_gene594 | TNF | tumor necrosis factor alpha | 1.62 | 3 |
 NC_030823.1_gene84 | IL-10 | interleukin-10 | 2.16 | 2.5 |
 NC_030830.1_gene686 | IL-17A | interleukin-17A | 2.18 | 1.6 |
 NC_030811.1_gene808 | IL-6 | interleukin-6 | 2.28 | 2.4 |
 NC_030814.1_gene174 | IL-12B | interleukin-12 subunit beta | 2.80 | 2.2 |
 NC_030814.1_gene828 | GM-CSF | granulocyte-macrophage colony-stimulating factor | 3.30 | 2.45 |