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Fig. 2 | BMC Genomics

Fig. 2

From: A survey of transcriptome complexity using PacBio single-molecule real-time analysis combined with Illumina RNA sequencing for a better understanding of ricinoleic acid biosynthesis in Ricinus communis

Fig. 2

CIRCOS visualization of gene and transcript density compared PacBio SMRT sequences with Ricinus communis reference genome for 20 top lengths of scaffolds. a Twenty longest scaffolds schematic. b Heat map of gene density distribution of PacBio SMRT sequences. Gene density was calculated in a 1-Mb sliding window at 20 kb intervals. c Heat map of transcripts density distribution of PacBio SMRT sequences. Gene density was calculated in a 1-Mb sliding window at 20 kb intervals. d Heat map of gene density distribution of the reference genome. Gene density was calculated in a 1-Mb sliding window at 20 kb intervals. e Heat map of transcripts density distribution of the reference genome. Gene density was calculated in a 1-Mb sliding window at 20 kb intervals

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