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Table 3 List of DEGs encoding key enzymes of ricinoleic acid biosynthesis at 14 DAF

From: A survey of transcriptome complexity using PacBio single-molecule real-time analysis combined with Illumina RNA sequencing for a better understanding of ricinoleic acid biosynthesis in Ricinus communis

Stages

Key enzyme

Gene ID

Databases

Annotation

Up/Down

14 DAF

AAT

29,848.t000233

KEGG

Fatty acyl-ACP thioesterase B (K10781)

Down

Pfam

Acyl-ACP thioesterase

30,217.t000013

KEGG

Fatty acyl-ACP thioesterase B (K10782)

Up

Pfam

Acyl-ACP thioesterase

30,147.t000739

KEGG

Fatty acyl-ACP thioesterase B (K10781)

Down

Pfam

Acyl-ACP thioesterase

PLC

30,147.t000759

KEGG

Phospholipase C (K01114)

Up

NR

Phospholipase C 4 precursor

29,847.t000014

NR

Phospholipase C, putative

Up

PLA2

30,170.t000326

GO

Phospholipase A2 activity (GO:0004623)

Down

30,142.t000005

GO

Phospholipase A2 activity (GO:0004623)

Down

28,470.t000001

KEGG

Phospholipase A2 (K14674)

Down

29,912.t000132

Pfam

Phospholipase A2

Down

Swiss-Prot

Probable phospholipase A2 homolog 1

29,840.t000027

Pfam

Phospholipase A2

Up

Swiss-Prot

Phospholipase A2-alpha (Precursor)

DAGT

30,131.t000161

Pfam

Diacylglycerol acyltransferase

Down

29,912.t000099

KEGG

Type 1 diacylglycerol acyltransferase (K11155)

Down

NR

Type 1 diacylglycerol acyltransferase

29,682.t000014

KEGG

Type 2 diacylglycerol acyltransferase (K14457)

Up

Pfam

Diacylglycerol acyltransferase

30,128.t000117

Pfam

Diacylglycerol acyltransferase

Down

PDAT

29,991.t000008

KEGG

Phospholipid:diacylglycerol acyltransferase (K00679)

Up

NR

Phosphatidylcholine: Diacylglycerol Acyltransferase

29,706.t000035

KEGG

Phospholipid:diacylglycerol acyltransferase (K00679)

Down

NR

Phosphatidylcholine: Diacylglycerol Acyltransferase

29,912.t000012

Swiss-Prot

Phospholipid: diacylglycerol acyltransferase

Up

LPCAT

30,170.t000414

KEGG

Lysophosphatidylcholine acyltransferase (K13510)

Down

Swiss-Prot

Lysophospholipid acyltransferase