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Table 4 List of DEGs enconding key enzymes of ricinoleic acid biosynthesis at 21 DAF

From: A survey of transcriptome complexity using PacBio single-molecule real-time analysis combined with Illumina RNA sequencing for a better understanding of ricinoleic acid biosynthesis in Ricinus communis

Stages Key enzyme Gene ID Databases Annotation Up/Down
21 DAF AAT 30,147.t000739 KEGG Fatty acyl-ACP thioesterase B (K10781) Up
Pfam Acyl-ACP thioesterase
PLC 30,142.t000002 KEGG Phospholipase C (K01114) Up
Swiss-Prot Phospholipase C2 (Precursor)
29,847.t000014 NR Phospholipase C, putative Up
29,801.t000111 NR Phospholipase C, putative Down
29,756.t000030 GO Phospholipase C activity (GO:0004629) Up
NR Phospholipase C, putative
PLA2 30,170.t000326 GO Phospholipase A2 activity (GO:0004623) Down
29,840.t000027 Pfam Phospholipase A2 Up
Swiss-Prot Phospholipase A2-alpha (Precursor)
PDAT 29,991.t000008 KEGG Phospholipid:diacylglycerol acyltransferase (K00679) Down
NR Phosphatidylcholine: Diacylglycerol Acyltransferase
29,912.t000012 Swiss-Prot Phospholipid:diacylglycerol acyltransferase Up
LPCAT 30,170.t000414 KEGG Lysophosphatidylcholine acyltransferase (K13510) Down
Swiss-Prot Lysophospholipid acyltransferase
30,174.t000334 KEGG Lysophosphatidylcholine acyltransferase (K13510) Down
Swiss-Prot Lysophospholipid acyltransferase