Skip to main content

Advertisement

Table 4 Similarity matrix between samples of all SNPs. All documented SNPs are included, first number is total count of similar SNP calls per total SNPs called between two samples

From: Novel subpopulations in date palm (Phoenix dactylifera) identified by population-wide organellar genome sequencing

  AG2 AG1 NA1 NA2 P P P P O
SAMPLE 15-JBR-AE 43-KHLS-QA 69-MDJL-US DegNoor P24-SYL-US P3-ROE-US P6-CAN-US Q19-THE-US braheaSpp
15-JBR-AE 1018/1018 920/1018 871/1018 918/1018 860/1018 491/997 719/1014 784/1016 291/851
43-KHLS-QA 920/1018 1018/1018 859/1018 1004/1018 856/1018 492/997 716/1014 779/1016 286/851
69-MDJL-US 871/1018 859/1018 1018/1018 859/1018 921/1018 481/997 726/1014 781/1016 281/851
DegNoor 918/1018 1004/1018 859/1018 1018/1018 856/1018 492/997 713/1014 778/1016 285/851
P24-SYL-US 860/1018 856/1018 921/1018 856/1018 1018/1018 489/997 739/1014 783/1016 296/851
P3-ROE-US 491/997 492/997 481/997 492/997 489/997 997/997 527/994 524/997 419/836
P6-CAN-US 719/1014 716/1014 726/1014 713/1014 739/1014 527/994 1014/1014 787/1012 319/851
Q19-THE-US 784/1016 779/1016 781/1016 778/1016 783/1016 524/997 787/1012 1016/1016 323/850
braheaSpp 291/851 286/851 281/851 285/851 296/851 419/836 319/851 323/850 851/851