Table 4 Similarity matrix between samples of all SNPs. All documented SNPs are included, first number is total count of similar SNP calls per total SNPs called between two samples
AG2 | AG1 | NA1 | NA2 | P | P | P | P | O | |
|---|---|---|---|---|---|---|---|---|---|
SAMPLE | 15-JBR-AE | 43-KHLS-QA | 69-MDJL-US | DegNoor | P24-SYL-US | P3-ROE-US | P6-CAN-US | Q19-THE-US | braheaSpp |
15-JBR-AE | 1018/1018 | 920/1018 | 871/1018 | 918/1018 | 860/1018 | 491/997 | 719/1014 | 784/1016 | 291/851 |
43-KHLS-QA | 920/1018 | 1018/1018 | 859/1018 | 1004/1018 | 856/1018 | 492/997 | 716/1014 | 779/1016 | 286/851 |
69-MDJL-US | 871/1018 | 859/1018 | 1018/1018 | 859/1018 | 921/1018 | 481/997 | 726/1014 | 781/1016 | 281/851 |
DegNoor | 918/1018 | 1004/1018 | 859/1018 | 1018/1018 | 856/1018 | 492/997 | 713/1014 | 778/1016 | 285/851 |
P24-SYL-US | 860/1018 | 856/1018 | 921/1018 | 856/1018 | 1018/1018 | 489/997 | 739/1014 | 783/1016 | 296/851 |
P3-ROE-US | 491/997 | 492/997 | 481/997 | 492/997 | 489/997 | 997/997 | 527/994 | 524/997 | 419/836 |
P6-CAN-US | 719/1014 | 716/1014 | 726/1014 | 713/1014 | 739/1014 | 527/994 | 1014/1014 | 787/1012 | 319/851 |
Q19-THE-US | 784/1016 | 779/1016 | 781/1016 | 778/1016 | 783/1016 | 524/997 | 787/1012 | 1016/1016 | 323/850 |
braheaSpp | 291/851 | 286/851 | 281/851 | 285/851 | 296/851 | 419/836 | 319/851 | 323/850 | 851/851 |