Table 3 LncRNAs and their potential target genes involved in melanogenesis
From: Integrated analysis of long non-coding RNA and mRNA expression in different colored skin of koi carp
Protein-coding genes | lncRNAs in cis | lncRNAs in trans |
|---|---|---|
Mitf | Ccr_lnc17821911 | Ccr_lnc125640361, Ccr_lnc1485701, Ccr_lnc5622421, Ccr_lnc17214525, Ccr_lnc8963611 |
Wnt3a | Ccr_lnc8247101 | Ccr_lnc105029701, Ccr_lnc1134941511, Ccr_lnc1442012, Ccr_lnc2059601, Ccr_lnc6033401, Ccr_lnc105029701 |
Tyr | Â | Ccr_lnc17214525, Ccr_lnc14830101, Ccr_lnc8963611 |
Tyrp1 | Â | Ccr_lnc16301123, Ccr_lnc5622441, Ccr_lnc8963611, Ccr_lnc822721141 |
Asip | Â | Ccr_lnc1485701, Ccr_lnc17214525, Ccr_lnc142711, Ccr_lnc113494151, Ccr_lnc11354001, Ccr_lnc8963611 |
Sox10 | Â | Ccr_lnc125640361, Ccr_lnc1485701, Ccr_lnc5622421, Ccr_lnc7090801, Ccr_lnc5622421,Ccr_lnc17214525 |
Tyk2 | Â | Ccr_lnc1134941511, Ccr_lnc11354001, Ccr_lnc15278331, Ccr_lnc11354001, Ccr_lnc12754831, Ccr_lnc12757551, Ccr_lnc131643581, Ccr_lnc14074601, Ccr_lnc14419221, Ccr_lnc14420121, Ccr_lnc14420301, Ccr_lnc147974311, Ccr_lnc17632401, Ccr_lnc175284642, Ccr_lnc3111401 |