Skip to main content

Table 3 The most significantly differentially expressed genes between high and low RFI Charolais steers across three dietary phases

From: The effect of breed and diet type on the global transcriptome of hepatic tissue in beef cattle divergent for feed efficiency

Diet and Breed

Gene

LogFC

P-value

CH.H1

TNFAIP3

0.66

0.0002

KRBA1

1.39

0.00069

SIK1

1.33

0.0043

IRS2

1.23

0.0043

CH.ZG

SLC39A4

−2.68

4.58E-09

BHMT2

1.26

7.60E-08

TNC

2.02

2.95E-07

ENSBTAG00000016032

1.58

2.95E-07

ABCA6

1.16

0.0001

CH.H2

LOC768255

−3.55

0.00024

GIMAP4

−3.08

0.0065

  1. RFI residual feed intake, CH Charolais, H1 high concentrate diet 1, H2 high concentrate diet 2, ZG zero-grazed grass diet, LogFC log2fold-change in low-RFI steers compared to high-RFI steers; P-value = Benjamini-Hochberg corrected P-value to account for multiple testing