From: Comparative transcriptomics suggest unique molecular adaptations within tardigrade lineages
Gene class/category | Tardigrada | Arthropoda | Nematoda | Chordata | Ascomycota | |||||
---|---|---|---|---|---|---|---|---|---|---|
Es | Rc | Rv | He | Dm | Ce | Hs | Xt | Dr | Sc | |
Tardigrade unique proteinsa | 0 | 23 | 32 | 25 | 0 | 0 | 0 | 0 | 0 | 0 |
Late Embryogenesis Abundant (LEA) b | 5 | 6 | 9 | 7 | 0 | 2 | 0 | 0 | 0 | 0 |
Heat shock proteinsc | 56 | 65 | 59 | 117 | 79 | 65 | 90 | 77 | 96 | 45 |
RNA/DNA Chaperones_Cold Shock Domain containingd | 3 | 1 | 1 | 1 | 1 | 6 | 5 | 5 | 3 | 0 |
DNA repair | (58) | (91) | (74) | (80) | (61) | (57) | (77) | (73) | (74) | (57) |
TP53 e | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 3 | 0 |
Base excision repairf | 18 | 31 | 24 | 27 | 15 | 13 | 22 | 21 | 19 | 14 |
Mismatch repairg | 15 | 20 | 13 | 16 | 10 | 12 | 14 | 14 | 14 | 14 |
Nucleotide excision repairh | 18 | 23 | 18 | 21 | 15 | 16 | 18 | 17 | 19 | 15 |
Non-homologous end-joiningi | 0 | 5 | 6 | 6 | 8 | 3 | 5 | 5 | 5 | 5 |
Homologous recombinationj | 7 | 11 | 12 | 9 | 12 | 12 | 15 | 13 | 14 | 9 |
Antioxidative stress | (70) | (79) | (79) | (89) | (82) | (89) | (66) | (53) | (68) | (29) |
Superoxide dismutases (SOD_CuZn; SOD_Mn) | 8 | 14 | 17 | 15 | 6 | 6 | 4 | 2 | 5 | 3 |
Catalase (CAT) | 0 | 4 | 4 | 4 | 2 | 3 | 1 | 2 | 1 | 2 |
Peroxiredoxins (PRDX) | 5 | 7 | 9 | 12 | 9 | 3 | 6 | 6 | 6 | 3 |
Thioredoxins (TXN; TXNRD; TXNL; TMX) | 12 | 13 | 10 | 12 | 14 | 11 | 14 | 12 | 14 | 8 |
Glutaredoxin (GLRX) | 5 | 4 | 3 | 3 | 4 | 6 | 4 | 4 | 4 | 5 |
Glutathione-disulfide reductase (GSR) | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 |
Glutathione peroxidase (GPX) | 2 | 1 | 1 | 1 | 2 | 8 | 8 | 6 | 9 | 3 |
Glutathione synthetase (GSS) | 1 | 2 | 2 | 3 | 2 | 1 | 1 | 1 | 1 | 1 |
Soluble glutathione S-transferases (GST soluble) | 35 | 30 | 31 | 34 | 38 | 49 | 22 | 13 | 20 | 2 |
Microsomal glutathione S-transferases (microsomal GST) | 0 | 2 | 0 | 2 | 3 | 0 | 4 | 5 | 6 | 0 |
Glucose-6-phosphate dehydrogenase (G6PD) | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 |
Peroxisomal biogenesis factorsk | 4 | 3 | 5 | 2 | 17 | 13 | 21 | 21 | 23 | 12 |
Trehalose metabolism | (3) | (9) | (10) | (9) | (5) | (8) | (2) | (2) | (2) | (7) |
Trehalose-phosphate synthase/phosphatase (TPS-TPP) | 0 | 1 | 1 | 0 | 2 | 3 | 0 | 0 | 0 | 4 |
Trehalases (PGGHG/ATHL1, TREH) | 3 | 8 | 9 | 9 | 3 | 5 | 2 | 2 | 2 | 3 |