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Table 2 DEGs, DEPs and DEMs involved in the pathways

From: Integrated application of multi-omics provides insights into cold stress responses in pufferfish Takifugu fasciatus

Pathway

Gene/Protein

Metabolite

Pyrimidine metabolism

Uridine phosphorylase 2

Uridine

Biosynthesis of unsaturated fatty acids

Acyl-CoA desaturase

Arachidonic acid (peroxide free) ;

(4Z,7Z,10Z,13Z,16Z,19Z)-4,7,10,13,16,19-Docosahexaenoic acid

Amino sugar and nucleotide sugar metabolism

N-acetyl-D-glucosamine kinase

D-mannose

Valine, leucine and isoleucine degradation

Acetoacetyl-CoA synthetase#

L-leucine

Glutathione metabolism

Glutathione S-transferase omega-1

Glutathione disulfide

Lysosome

Acid phosphatase

D-mannose

ABC transporters

Bile salt export pump;

Canalicular multispecific organic anion transporter 1+

Maltotriose;L-lysine;

L-leucine;D-mannose;

D-maltose;Betaine;

cAMP signaling pathway

Hormone-sensitive lipase+

Adenosine

Vitamin digestion and absorption

Retinol-binding protein 2

Pantothenate;

Nicotinamide;

Bile secretion

Solute carrier family 2, facilitated glucose transporter member 1;

Ubiquitin-associated protein 1-like;

Bile salt export pump;

Canalicular multispecific organic anion transporter 1+

Taurocholate;

L-carnitine

Retrograde endocannabinoid signaling

Guanine nucleotide-binding protein subunit beta-4

Arachidonic acid (peroxide free) ;

PC(16:0/16:0)

Serotonergic synapse

Guanine nucleotide-binding protein subunit beta-4

Arachidonic acid (peroxide free) ;

Regulation of lipolysis in adipocyte

Hormone-sensitive lipase+

Arachidonic acid (peroxide free) ;

Adenosine

Aldosterone synthesis and secretion

Hormone-sensitive lipase+

Arachidonic acid (peroxide free) ;

Longevity regulating pathway – worm

Acyl-CoA desaturase

Nicotinamide

Central carbon metabolism in cancer

Solute carrier family 2, facilitated glucose transporter member 1

L-leucine

Morphine addiction

Guanine nucleotide-binding protein subunit beta-4

Adenosine

Alcoholism

Guanine nucleotide-binding protein subunit beta-4

Adenosine

Parkinson disease

ATP synthase-coupling factor 6

Adenosine

Insulin resistance

Solute carrier family 2, facilitated glucose transporter member 1

Acetylcarnitine

  1. “↑” superscripts indicate significantly up-regulated
  2. “↓” superscripts indicate significantly down-regulated
  3. “+” superscript indicates that the gene was significantly up-regulated at the mRNA level and significantly down-regulated at the protein level
  4. “#” superscript indicates that the gene was significantly down-regulated at the mRNA level and significantly up-regulated at the protein level