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Table 3 Top ten upregulated and top ten downregulated genes in the oviduct between the period before (BFNP_O) and after (AFNP_O) the foam nest construction in Rhacophorus omeimontis

From: Transcriptomic analysis of differentially expressed genes in the oviduct of Rhacophorus omeimontis provides insights into foam nest construction

Gene ID BFNP_O FPKM AFNP_O FPKM log2 FC FDR Gene description
Upregulated genes
 comp102470_c0 83,413.99956 45.86109708 10.829 4.99E-15 Vitelline membrane outer layer protein 1 homolog precursor (VMO1)
 comp105433_c0 1,464,303.449 2473.865279 9.2092 6.67E-12 Regenerating islet-derived protein 4-like (REG4)
 comp116497_c3 282,853.1745 960.5393083 8.202 4.19E-10 C3 and PZP-like alpha −2- macroglobulin domain-containing protein 9 (CPAMD9)
 comp86479_c0 240,749.3995 927.3587874 8.0202 1.83E-09 Lysozyme C-2 precursor (LYZ2)
 comp86445_c0 52,409.4277 19.36436651 11.402 4.27E-07 Hypothetical protein
 comp63781_c0 370.8359078 2.766443957 7.0666 6.62E-07 Interleukin 17B precursor (IL17B)
 comp93501_c0 8951.186584 86.50103654 6.6932 1.57E-06 Regenerating islet-derived protein 4-like (REG4)
 comp112645_c0 975.690657 13.13121608 6.2154 4.51E-06 LOC100158309 protein
 comp111158_c1 410.1014732 3.763068643 6.7679 1.06E-05 ORF2
 comp93501_c1 46,423.55193 845.0879313 5.7796 1.39E-05 Regenerating islet-derived protein 4-like (REG4)
Downregulated genes
 comp83066_c0 17.63586872 12,383.38172 −9.4557 1.37E-09 Apolipoprotein C-I-like (APOC-1)
 comp86958_c0 15.29489023 975.5912786 −5.9952 3.04E-05 Matrix metalloproteinase-18 (mmp18)
 comp93961_c0 2.611183539 200.4585611 −6.2625 5.69E-05 Receptor-transporting protein 3 (Rtp3)
 comp110795_c0 5.596429558 271.7805192 −5.6018 0.000229 Granulocyte-macrophage colony-stimulating factor receptor subunit alpha (CD116)
 comp115970_c0 81.27326898 5454.637376 −6.0686 0.000528 Poly [ADP-ribose] polymerase 14-like (PARP14)
 comp98850_c0 12.0415714 978.7260655 −6.3448 0.000528 MHC class I antigen, partial (MHC I)
 comp112386_c0 13.56931178 432.0370548 −4.9927 0.000625 Hypothetical protein
 comp105453_c0 1.470656838 98.15940537 −6.0606 0.000742 Cytochrome P450 family 11 subfamily A polypeptide 1 (CYP11A1)
 comp108188_c0 2.582748907 137.2794339 −5.7321 0.00079 RING finger protein 213-like (RNF213)
 comp107251_c1 35.30863025 898.6047342 −4.6696 0.000826 Complement component 7 precursor (C7)
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BMC Genomics

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