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Table 2 Top five loci associated with heifer conception rate to repeated AI services (TBRD)

From: Validation of 46 loci associated with female fertility traits in cattle

BTAa BP Positionb SNP IDc Modeld P-valuee
1 3,546,098 (4,253,950) rs136767715 Dominant 1.56 × 10− 26
1 14,740,447 (15,273,288) rs109845303 Recessive 3.55 × 10−14
1 69,793,194 (69,188,246) rs137088827 Recessive 3.57 × 10−17
4 37,235,676 (37,056,340) rs133417267 Additive 4.23 × 10− 21
5 27,837,406 (27,683,283) rs134147281 Recessive 6.66 × 10−15
10 59,882,200 (59,695,958) rs110617366 Additive, Dominant 1.17 × 10−20, 1.57 × 10−27
18 21,929,721 (21,851,964) rs41872094 Additive, Dominant 2.15 × 10−19, 6.27 × 10−29
20 57,113,135 (57,038,642) rs41956232 Additive, Dominant 3.76 × 10−19, 4.81 × 10−26
24 50,503,943 (50,038,623) rs110770205 Recessive 3.46 × 10−16
25 4,169,181 (4,151,257) rs110089590 Recessive 1.76 × 10−14
27 21,375,791 (22,307,598) rs132728892 Additive, Dominant 9.10 × 10−40, 9.10 × 10− 40
  1. a Chromosome location of the locus
  2. b Single nucleotide polymorphism (SNP) location as measured by numbered nucleotides in reference to the UMD 3.1 genome assembly (http://bovinegenome.org/?q=node/61; accessed 15 September 2016) or the ARS-UCD 1.2 genome assembly (https://www.animalgenome.org/repository/cattle/UMC_bovine_coordinates/; accessed 19 September 2018) in parentheses
  3. c The most significant SNP in the locus associated with heifer conception rate as identified by rs number which is a reference number assigned to markers submitted to the National Center for Biotechnology Information SNP database (https://www.ncbi.nlm.nih.gov/projects/SNP/; accessed 9 March 2016)
  4. d Genome-wide association model
  5. e Significance (P-value) of the most significant SNP associated with heifer conception rate