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Table 3 Top additive and dominant loci across conception rate at first service and to repeated AI services

From: Validation of 46 loci associated with female fertility traits in cattle

BTAa BP Positionb SNP IDc Modeld P-valuee Positional Candidate Gene
HCR1 TBRD
4 37,235,676 (37,056,340) rs133417267 Additive, Dominant 6.93 × 10−21, 6.93 × 10− 21 4.23 × 10− 21, 4.23 × 10− 21
10 59,882,200 (59,695,958) rs110617366 Additive, Dominant 7.12 × 10−18, 1.34 × 10− 23 1.17 × 10− 20, 1.57 × 10− 27 TRPM7
20 57,113,135 (57,038,642) rs41956232 Additive, Dominant 1.15 × 10−13, 3.03 × 10− 18 3.76 × 10− 19, 4.81 × 10− 26 MARCH11
27 21,375,791 (22,307,598) rs132728892 Additive, Dominant 8.35 × 10− 52, 8.35 × 10− 52 9.10 × 10− 40, 9.10 × 10− 40 MIR383
  1. a Chromosome location of the locus
  2. b Single nucleotide polymorphism (SNP) location as measured by numbered nucleotides in reference to the UMD 3.1 genome assembly (http://bovinegenome.org/?q=node/61; accessed 15 September 2016) or the ARS-UCD 1.2 genome assembly (https://www.animalgenome.org/repository/cattle/UMC_bovine_coordinates/; accessed 19 September 2018) in parentheses
  3. c The most significant SNP in the locus associated with heifer conception rate as identified by rs number which is a reference number assigned to markers submitted to the National Center for Biotechnology Information SNP database (https://www.ncbi.nlm.nih.gov/projects/SNP/; accessed 9 March 2016)
  4. d Genome-wide association model
  5. e Significance (P-value) of the most significant SNP associated with heifer conception rate