Skip to main content

Advertisement

Table 4 lincRNA-DH correlated with target loci steady-state mRNA level. Number of pairs with either a positive or negative correlation between putative lincRNA-DH and predicted target mRNA expression. The experimental conditions compared are indicated in the first column where “ctrl” indicates untreated control. The figures in brackets show the number of those pairs with a Pearson correlation coefficient > 0.6 or < -0.6 across the 12 experimental correlations

From: Prediction of regulatory long intergenic non-coding RNAs acting in trans through base-pairing interactions

Treatment Positive correlation Negative correlation
Low Pi vs High Pi 29 (22) 24 (4)
Root ABA vs Root ctrl 13 (5) 5 (1)
Root MeJA vs Root ctrl 5 (2) 1 (0)
Shoot ABA vs Shoot ctrl 8 (1) 6 (0)
Shoot IAA vs Shoot ctrl 1 (1) 0 (0)
Root ctrl vs Shoot ctrl 67 (43) 54 (33)
Total (unique) 100 (64) 81 (37)