Table 1 The BURP genes in three cotton species
ID | Name | Length of amino acids | Molecular weight/kDa | Theoretical pI | Grand average cof hydropathicity | Predicted subcellular localization | Chromosome number | Location |
|---|---|---|---|---|---|---|---|---|
Ga03G2725 | GaBNM1 | 281 | 31.42 | 7.6 | 0.046 | Plasma Membrane | Chr03 | 135165245–135166171(+) |
Ga04G0288 | GaBNM2 | 298 | 33.34 | 5.94 | −0.189 | Extracellular | Chr04 | 3515535–3516509(+) |
Ga08G0770 | GaBNM3 | 472 | 53.09 | 5.66 | −0.45 | Nuclear | Chr08 | 12701857–12704664(+) |
Ga03G2726 | GaBNM4 | 285 | 31.47 | 8.66 | 0.233 | Plasma Membrane | Chr03 | 135167409–135168579(+) |
Ga07G1165 | GaBNM5 | 599 | 67.33 | 5.99 | −0.651 | Cytoplasmic(1.355) /Nuclear(1.514) | Chr07 | 18163166–18165657(+) |
Ga10G0842 | GaBNM6 | 397 | 44.68 | 5.97 | −0.338 | Cytoplasmic | Chr10 | 17979735–17981015(−) |
Ga13G0509 | GaBNM7 | 277 | 31.26 | 7.64 | 0.144 | Plasma Membrane | Chr13 | 6572148–6573084(−) |
Ga05G0755 | GaBURP1 | 305 | 34.26 | 6.83 | −0.085 | Extracellular | Chr05 | 6608432–6613461(−) |
Ga05G0756 | GaBURP2 | 186 | 20.32 | 6.05 | 0.131 | Extracellular(1.412) /Plasma Membrane(1.195) /Cytoplasmic(1.317) | Chr05 | 6615692–6631332(−) |
Ga08G0163 | GaBURP3 | 220 | 24.89 | 9.28 | −0.148 | Plasma Membrane(1.255)/ Mitochondrial(1.673) | Chr08 | 1266719–1267381(+) |
Ga08G0165 | GaBURP4 | 220 | 24.79 | 9.39 | −0.13 | Plasma Membrane(1.274)/ Mitochondrial(1.775) | Chr08 | 1275432–1276094(+) |
Ga08G0166 | GaBURP5 | 482 | 52.61 | 7.6 | −0.426 | Extracellular(1.491) /Nuclear(1.126) | Chr08 | 1284145–1287039(+) |
Ga13G2660 | GaBURP6 | 243 | 26.95 | 9.05 | −0.315 | Cytoplasmic(1.095) /Mitochondrial(1.053) /Nuclear(1.020) | Chr13 | 122516969–122517700(+) |
Ga03G1868 | GaPG2 | 609 | 66.63 | 6.23 | −0.52 | Extracellular | Chr03 | 120728911–120730947(+) |
Ga01G1594 | GaPG3 | 604 | 66.39 | 6.94 | −0.52 | Extracellular | Chr01 | 65377300–65380623(+) |
Ga03G1340 | GaPG1 | 649 | 71.18 | 9.01 | −0.437 | Extracellular(1.520) /Vacuole(1.353) | Chr03 | 80058785–80060850(+) |
Ga05G0527 | GaRD1 | 335 | 36.56 | 6.64 | −0.268 | Extracellular(1.555) /Cytoplasmic(1.749) | Chr05 | 4680805–4689016(+) |
Gorai.005G261700.1 | GrBNM1 | 281 | 31.47526 | 8.08 | −0.097 | Cytoplasmic | Chr05 | 63641010–63642551(+) |
Gorai.012G152100.1 | GrBNM2 | 298 | 33.30303 | 5.99 | −0.201 | Periplasmic(1.851) /Cytoplasmic(1.347) | Chr12 | 32624207–32625595(−) |
Gorai.004G078900.1 | GrBNM3 | 472 | 52.84154 | 5.62 | −0.494 | OuterMembrane | Chr04 | 9346335–9348788(+) |
Gorai.005G261800.1 | GrBNM4 | 238 | 26.04937 | 8.91 | 0.017 | Periplasmic | Chr05 | 63644230–63645258(+) |
Gorai.001G119700.1 | GrBNM5 | 515 | 57.90174 | 5.83 | −0.514 | Extracellular(1.226) /Periplasmic(1.798) | Chr01 | 14537465–14539428(+) |
Gorai.011G215100.1 | GrBNM6 | 397 | 44.7685 | 6.03 | −0.327 | Periplasmic | Chr11 | 51614479–51617258(+) |
Gorai.013G053000.1 | GrBNM7 | 277 | 31.26245 | 8.1 | 0.114 | InnerMembrane(1.706) /Cytoplasmic(2.014) | Chr13 | 4975454–4976764(−) |
Gorai.009G074500.1 | GrBURP1 | 313 | 35.32591 | 8.58 | −0.13 | Periplasmic(1.816) /Cytoplasmic(2.181) | Chr09 | 5341346–5342757(−) |
Gorai.009G074600.1 | GrBURP2 | 212 | 23.94261 | 5.69 | −0.075 | Cytoplasmic | Chr09 | 5343679–5344657(−) |
Gorai.009G074700.1 | GrBURP3 | 256 | 28.12751 | 7.61 | −0.118 | Periplasmic | Chr09 | 5350696–5351800(−) |
Gorai.004G015400.1 | GrBURP4 | 220 | 24.78878 | 9.18 | −0.15 | Cytoplasmic | Chr04 | 1118786–1119620(+) |
Gorai.004G015500.1 | GrBURP5 | 276 | 30.39973 | 8.95 | −0.274 | Extracellular(1.393) /OuterMembrane(1.389) /Periplasmic(1.366) | Chr04 | 1126045–1127011(+) |
Gorai.013G252700.1 | GrBURP6 | 243 | 26.91194 | 8.85 | −0.314 | OuterMembrane(1.167) /Periplasmic(1.647) /Cytoplasmic(1.550) | Chr13 | 57021536–57022390(+) |
Gorai.005G136300.1 | GrPG1 | 649 | 71.54197 | 9.01 | −0.428 | OuterMembrane | Chr05 | 35061399–35063863(+) |
Gorai.005G182600.1 | GrPG2 | 628 | 68.66988 | 7.22 | −0.514 | OuterMembrane | Chr05 | 53449903–53452254(+) |
Gorai.002G161400.1 | GrPG3 | 616 | 67.72389 | 7.96 | −0.511 | OuterMembrane | Chr02 | 36980855–36983098(+) |
Gorai.009G052100.1 | GrRD1 | 396 | 42.13522 | 9.19 | −0.326 | Periplasmic | Chr09 | 3755513–3757859(+) |
Gorai.009G052200.1 | GrRD2 | 367 | 40.09897 | 6.36 | −0.258 | Periplasmic | Chr09 | 3760180–3772019(+) |
Gh_A03G1881 | GhBNM1 | 281 | 31.34713 | 8.37 | −0.063 | Cytoplasmic | A03 | 99771377–99772299(+) |
Gh_D02G2319 | GhBNM2 | 281 | 31.50228 | 8.08 | −0.107 | Cytoplasmic | D02 | 66842483–66843403(+) |
Gh_A04G1039 | GhBNM3 | 298 | 33.32507 | 5.94 | −0.187 | Periplasmic(1.909) /Cytoplasmic(1.301) | A04 | 60430883–60431857(−) |
Gh_A08G0606 | GhBNM4 | 733 | 81.84821 | 5.74 | −0.661 | OuterMembrane | A08 | 11071560–11073866(+) |
Gh_A07G0976 | GhBNM5 | 547 | 61.31128 | 5.79 | −0.607 | Extracellular(1.490)/Extracellular(1.357) /Cytoplasmic(1.067) | A07 | 18492640–18494375(+) |
Gh_D07G1054 | GhBNM6 | 567 | 63.70206 | 5.9 | −0.591 | Extracellular(1.496) /Periplasmic(1.625) | D07 | 14895486–14899357(+) |
Gh_A10G1660 | GhBNM7 | 252 | 28.01502 | 6.36 | −0.094 | Periplasmic(2.091) /Cytoplasmic(1.920) | A10 | 88329967–88330725(+) |
Gh_D10G1918 | GhBNM8 | 252 | 28.07105 | 6.48 | −0.113 | Periplasmic(2.080) /Cytoplasmic(1.909) | D10 | 53448375–53449133(+) |
Gh_D13G0464 | GhBNM9 | 277 | 31.26245 | 8.1 | 0.114 | InnerMembrane(1.706) /Cytoplasmic(2.014) | D13 | 5415661–5416581(−) |
Gh_A05G0583 | GhBUPR1 | 313 | 35.26984 | 8.57 | −0.136 | Periplasmic(1.899) /Cytoplasmic(2.139) | A05 | 6266697–6267846(−) |
Gh_D05G0713 | GhBUPR2 | 313 | 35.29288 | 8.57 | −0.127 | Periplasmic(2.076) /Cytoplasmic(1.899) | D05 | 5850057–5851213(−) |
Gh_A05G0584 | GhBUPR3 | 212 | 23.86255 | 5.69 | −0.074 | Cytoplasmic | A05 | 6268879–6269517(−) |
Gh_D05G0714 | GhBUPR4 | 212 | 23.91258 | 5.88 | −0.092 | Cytoplasmic | D05 | 5852228–5852866(−) |
Gh_A05G0585 | GhBUPR5 | 166 | 18.02802 | 6.57 | 0.224 | Periplasmic | A05 | 6274388–6275502(−) |
Gh_A08G2518 | GhBUPR6 | 220 | 24.83185 | 9.28 | −0.145 | Periplasmic(1.731) /Cytoplasmic(2.249) | scaffold2270_A08 | 37419–38081(+) |
Gh_D08G2754 | GhBUPR7 | 220 | 24.67866 | 9.04 | −0.106 | Periplasmic(1.664) /Cytoplasmic(2.128) | scaffold4315_D08 | 128279–128941(+) |
Gh_A08G2519 | GhBUPR8 | 482 | 52.57868 | 6.56 | −0.414 | OuterMembrane | scaffold2270_A08 | 42942–45824(+) |
Gh_D08G2755 | GhBUPR9 | 276 | 30.33856 | 8.16 | −0.261 | Extracellular(1.170) /OuterMembrane(1.349) /Periplasmic(1.450) | scaffold4315_D08 | 133781–135310(+) |
Gh_A13G1887 | GhBUPR10 | 243 | 26.92202 | 9.04 | −0.312 | Periplasmic | A13 | 78553086–78553817(+) |
Gh_D13G2274 | GhBUPR11 | 243 | 26.86994 | 9.05 | −0.313 | Periplasmic(1.924) /Cytoplasmic(1.410) | D13 | 58789956–58790687(+) |
Gh_A03G0838 | GhPG1 | 649 | 71.20247 | 9.06 | −0.447 | OuterMembrane | A03 | 45353566–45355631(+) |
Gh_D02G1172 | GhPG2 | 649 | 71.38377 | 9.07 | −0.431 | OuterMembrane | D02 | 35492312–35494383(−) |
Gh_A03G1222 | GhPG3 | 628 | 68.85208 | 6.74 | −0.509 | OuterMembrane | A03 | 86599810–86601849(+) |
Gh_D02G1656 | GhPG4 | 628 | 68.76397 | 6.94 | −0.515 | OuterMembrane | D02 | 57114338–57116390(+) |
Gh_D01G2373 | GhPG5 | 616 | 67.78298 | 7.96 | −0.508 | OuterMembrane | scaffold3762_D01 | 162083–164005(−) |
Gh_Sca004926G01 | GhPG6 | 616 | 67.97921 | 6.47 | −0.507 | OuterMembrane | scaffold4926 | 17075–18997(+) |
Gh_A05G0390 | GhRD1 | 376 | 40.25604 | 8.85 | −0.299 | Periplasmic | A05 | 4358119–4359765(+) |
Gh_D05G0507 | GhRD2 | 376 | 40.22106 | 9.01 | −0.304 | Periplasmic | D05 | 4071766–4073401(+) |
Gh_A05G0391 | GhRD3 | 335 | 36.60908 | 6.89 | −0.267 | Periplasmic | A05 | 4369019–4370547(+) |
Gh_D05G0508 | GhRD4 | 335 | 36.49686 | 6.89 | −0.283 | Periplasmic | D05 | 4091376–4092898(+) |