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Fig. 2 | BMC Genomics

Fig. 2

From: Evaluating the quality of the 1000 genomes project data

Fig. 2

Genotyping error a in the experimental VCF positions (non-hom ref. SNPs) as a function of continent-specific minor allele frequency averaged over all chromosomes over all individuals in each continent b in experimental VCF positions comparing SNPs with homozygous alternate vs heterozygous calls in the experimental data c false positive vs false negative rates (defined in text) for all 1000 Genomes SNPs

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