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Table 2 Reference genome and annotation (GFF) sources

From: Impact of sequencing depth and technology on de novo RNA-Seq assembly

Species RefSeq Assembly and Annotation Genome (bp) Total Gaps (bp) Exome (bp)
Homo sapiens GCF_000001405.29_GRCh38.p3 3 226 010 022 161 368 151 120 562 222
Mus musculus GCF_000001635.24_GRCm38.p4 2 803 568 840 79 356 756 114 986 282
Drosophila melanogaster GCF_000001215.4_Release_6_plus_ISO1_MT 143 726 002 1 152 978 35 879 647
Caenorhabditis elegans GCF_000002985.6_WBcel235 100 286 401 0 26 801 799
Oryza sativa GCF_000005425.2_Build_4.0 382 778 125 10 060 004 49 757 833
Arabidopsis thaliana GCF_000001735.3_TAIR10 119 667 750 185 644 57 812 822
  1. All genome sequence and GFF reference files were obtained from the NCBI Assembly database