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Table 1 Genomic properties of the three “Ca. Methylacidiphilum” species for which a closed genome is available

From: Complete genome sequence analysis of the thermoacidophilic verrucomicrobial methanotroph “Candidatus Methylacidiphilum kamchatkense” strain Kam1 and comparison with its closest relatives

 

Kam1a

SolVb

V4c

Size (bp)

2,202,032

2,476,671

2,287,145

Contigs

1

1

1

GC %

40.34

41.48

45.48

RNAs

53

49

52

CDS

2119

2741

2473

16S

1

1

1

pmoAs

4

3

3

CRISPR spacers

17

23

20

Phages

0

0

0

Integrated plasmids

1

1

1

Transposable elements

12

80

37

Genomic islands

2

22

9

Locus tag prefix

Ga0255985_11e; kam1_f

Mfumv2_g; (Ga0069468_11)e

Minf_

IMG genome IDd

2,770,939,480

2,630,968,640

642,555,138

Genbank accession

CP037899

PRJEB6910

CP000975

  1. aCa. Methylacidiphilum kamchatkense” Kam1, this study
  2. bCa. Methylacidiphilum fumariolicum” SolV, [14]
  3. cCa. Methylacidiphilum infernorum” V4, [13]
  4. dIntegrated Microbial Genomes and Microbiomes [17]
  5. eLocus tag prefixes from Integrated Microbial Genomes and Microbiomes IMG/ER [17]
  6. fLocus tag prefixes from National Center for Biotechnology Information (NCBI)
  7. gLocus tag prefixes and annotation as given by Mohammadi and colleagues 2017 [16]